RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 PPM1LQ5SGD2 360 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 GRTP1Q5TC63 336 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 UGT2A3Q6UWM9 527 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 STRA8Q7Z7C7 330 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 DEFB106AQ8N104 65 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 SPPL3Q8TCT6 385 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 RNF139Q8WU17 664 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 AUTS2Q8WXX7 1259 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 AGAP3Q96P47 875 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 CENPKQ9BS16 269 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 WDR55Q9H6Y2 383 aaPredicted RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
RBM39-243ENST00000528062 COX16Q9P0S2 106 aa13.19□□□□□ -0.3
RBM39-243ENST00000528062 C5orf42Q9H799 3197 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 A0A1W2PPC1 479 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 GRM6O15303 877 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 HUS1O60921 280 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 CHRNGP07510 517 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SPATA31D3P0C874 917 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 PABPC4LP0CB38 370 aaKnown RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 TYMPP19971 482 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ACAT1P24752 427 aaKnown RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 PRDX6P30041 224 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SERPINB5P36952 375 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 NUMBP49757 651 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 PGGT1BP53609 377 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 XIAPP98170 497 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 CCDC153Q494R4 210 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 OGFRL1Q5TC84 451 aaPredicted RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 PRSS55Q6UWB4 352 aaPredicted RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 SPATA31D4Q6ZUB0 917 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SATL1Q86VE3 508 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ZNF669Q96BR6 464 aaPredicted RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 TIFAQ96CG3 184 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 RTKNQ9BST9 563 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 HERC2P3Q9BVR0 1158 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ZBP1Q9H171 429 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 PCDHGB4Q9UN71 923 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SSX2IPQ9Y2D8 614 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 CDY1Q9Y6F8 540 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 A0A096LPK6 155 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ZCWPW2A0A1B0GU75 182 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 TXNDC9O14530 226 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SYN3O14994 580 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ADAM12O43184 909 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 CREB3O43889 395 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 FBXO21O94952 628 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 OR6B1O95007 311 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 OAZ2O95190 189 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 MPSTP25325 297 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SULT1E1P49888 294 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SERPINB8P50452 374 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 LIMK2P53671 638 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 BCAT1P54687 386 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ERVFC1P60507 584 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 FOLH1Q04609 750 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 TLR1Q15399 786 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 GRAMD1BQ3KR37 738 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ANKRD20A4Q4UJ75 823 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 ISLR2Q6UXK2 745 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 TDRD5Q8NAT2 981 aaKnown RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 SLC2A14Q8TDB8 520 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 PPP1R36Q96LQ0 422 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 GCNAQ96QF7 691 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 PKMYT1Q99640 499 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 GATA5Q9BWX5 397 aaPredicted RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 VCX3BQ9H321 246 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 MSRAQ9UJ68 235 aa13.18□□□□□ -0.3
RBM39-243ENST00000528062 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
RBM39-243ENST00000528062 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
RBM39-243ENST00000528062 KLHL33A6NCF5 533 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 AIM2O14862 343 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 LILRB3O75022 631 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 SMIM18P0DKX4 95 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 PAX3P23760 479 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 SCNN1AP37088 669 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 GARSP41250 739 aaKnown RBP13.17□□□□□ -0.3
RBM39-243ENST00000528062 MATKP42679 507 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 SNX16P57768 344 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 YWHAHQ04917 246 aaPredicted RBP13.17□□□□□ -0.3
RBM39-243ENST00000528062 FSCBQ5H9T9 825 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 OVOS1Q6IE37 1185 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 UNC93AQ86WB7 457 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 TMEM86AQ8N2M4 240 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 POF1BQ8WVV4 589 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 MFSD3Q96ES6 412 aa13.17□□□□□ -0.3
RBM39-243ENST00000528062 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms