RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 GDAP1L1Q96MZ0 367 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 SYT11Q9BT88 431 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 DUSP23Q9BVJ7 150 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 CALN1Q9BXU9 219 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 USP29Q9HBJ7 922 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 GPR27Q9NS67 375 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 EVA1BQ9NVM1 165 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 AIPL1Q9NZN9 384 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 DKK3Q9UBP4 350 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 PLXNA2O75051 1894 aa14.41□□□□□ -0.1
CAPN1-212ENST00000527887 KRIT1O00522 736 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 TEX33O43247 280 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 PIAS2O75928 621 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 TMCC1O94876 653 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 IGSF6O95976 241 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 NDST2P52849 883 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 DNAJC3Q13217 504 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-212ENST00000527887 MAMLD1Q13495 774 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 SERINC3Q13530 473 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 PLEKHA7Q6IQ23 1121 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 GDPD4Q6W3E5 623 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 TMC6Q7Z403 805 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 TTC7BQ86TV6 843 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 PSTKQ8IV42 348 aaKnown RBP14.4□□□□□ -0.1
CAPN1-212ENST00000527887 PYROXD2Q8N2H3 581 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 SLC25A45Q8N413 288 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 FNIP1Q8TF40 1166 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 PDLIM2Q96JY6 352 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 C1QTNF7Q9BXJ2 289 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 MAGEB5Q9BZ81 275 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 CPEB1Q9BZB8 566 aaKnown RBP14.4□□□□□ -0.1
CAPN1-212ENST00000527887 NOL6Q9H6R4 1146 aaKnown RBP14.4□□□□□ -0.1
CAPN1-212ENST00000527887 CA5BQ9Y2D0 317 aa14.4□□□□□ -0.1
CAPN1-212ENST00000527887 SPTY2D1-AS1A0A0U1RR47 76 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 IGLON5A6NGN9 336 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 RASA4BC9J798 803 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 H3BM21 787 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 AREL1O15033 823 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 SCAMP1O15126 338 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 RASA4O43374 803 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 CREB3O43889 395 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 RNF8O76064 485 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 CSF2P04141 144 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 UGT2B4P06133 528 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 PRKCIP41743 596 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 DUSP3P51452 185 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-212ENST00000527887 CLDN2P57739 230 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 FGL2Q14314 439 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 FAM181AQ8N9Y4 354 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 MDM1Q8TC05 714 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 NXPE2Q96DL1 559 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 TRIM11Q96F44 468 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 KLHL32Q96NJ5 620 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 MYOCQ99972 504 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 NRSN2Q9GZP1 204 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 FZD3Q9NPG1 666 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 SCUBE2Q9NQ36 999 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 NLGN3Q9NZ94 848 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 NCKIPSDQ9NZQ3 722 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 GPSM3Q9Y4H4 160 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 ACTL7AQ9Y615 435 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 CSNK1G3Q9Y6M4 447 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 NBEAQ8NFP9 2946 aa14.39□□□□□ -0.11
CAPN1-212ENST00000527887 NYNRINQ9P2P1 1898 aaKnown RBP14.39□□□□□ -0.11
CAPN1-212ENST00000527887 DOCK4Q8N1I0 1966 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 ZFYVE26Q68DK2 2539 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 FAM149AA5PLN7 773 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 POM121BA6NF01 834 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 TRIM38O00635 465 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 SIGLEC6O43699 453 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 SDC3O75056 442 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 CKMT1AP12532 417 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 PSMA2P25787 234 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 GKP32189 559 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 ABL2P42684 1182 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 TPI1P60174 286 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 PFN3P60673 137 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 RHOAP61586 193 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 YPEL5P62699 121 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 DAB2P98082 770 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 CYP4F3Q08477 520 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 ACAP1Q15027 740 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 ASIC2Q16515 512 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 FIGNQ5HY92 759 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 PTAR1Q7Z6K3 402 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-212ENST00000527887 PARGQ86W56 976 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 DNAAF5Q86Y56 855 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 SLC22A18ASQ8N1D0 253 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 OR6K2Q8NGY2 324 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 BTN2A2Q8WVV5 523 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 VOPP1Q96AW1 172 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 HMCESQ96FZ2 354 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 KLF6Q99612 283 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-212ENST00000527887 LRRC19Q9H756 370 aa14.38□□□□□ -0.11
CAPN1-212ENST00000527887 MRPL47Q9HD33 250 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms