RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 C16orf46Q6P387 395 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 CIR1Q86X95 450 aaPredicted RBP15.22■□□□□ 0.03
USP47-207ENST00000527733 CPA6Q8N4T0 437 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 SLC35B2Q8TB61 432 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 ZNF75CPQ92670 426 aaPredicted RBP15.22■□□□□ 0.03
USP47-207ENST00000527733 MYO19Q96H55 970 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 ZIC5Q96T25 663 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 ARIH1Q9Y4X5 557 aaPredicted RBP15.22■□□□□ 0.03
USP47-207ENST00000527733 MYO9BQ13459 2157 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 CST5P28325 142 aaPredicted RBP15.22■□□□□ 0.03
USP47-207ENST00000527733 HALP42357 657 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 PFKPQ01813 784 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 IFNEQ86WN2 208 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 FAM9CQ8IZT9 166 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 LEMD2Q8NC56 503 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 ELOVL6Q9H5J4 265 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 A0A1W2PRU2 124 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 HAS3O00219 553 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 TCF4P15884 667 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 HCAR3P49019 387 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 WNT7BP56706 349 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 BTKQ06187 659 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 CTBP1Q13363 440 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 TRAPPC5Q8IUR0 188 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 OR4L1Q8NH43 312 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 NPY6RQ99463 290 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 SMOC2Q9H3U7 446 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 SPASTQ9UBP0 616 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 CCNT2O60583 730 aaKnown RBP15.21■□□□□ 0.03
USP47-207ENST00000527733 KRT6AP02538 564 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 KRT6BP04259 564 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 CCDC166P0CW27 439 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 IL10P22301 178 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.03
USP47-207ENST00000527733 CPA2P48052 419 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 KRT6CP48668 564 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 CCNG1P51959 295 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 SPDYE7PQ495Y7 208 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 SYTL1Q8IYJ3 562 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 STAG3L4Q8TBR4 150 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 ERLEC1Q96DZ1 483 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 TEKT5Q96M29 485 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 TMEM120AQ9BXJ8 343 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 PHF24Q9UPV7 400 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 RAI2Q9Y5P3 530 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 DSC2Q02487 901 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 ADGRF1Q5T601 910 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 GRAMD4Q6IC98 578 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 LINGO4Q6UY18 593 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 PSMG2Q969U7 264 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 GAS2L1Q99501 681 aaPredicted RBP15.21■□□□□ 0.03
USP47-207ENST00000527733 SLC39A8Q9C0K1 460 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 MRPL46Q9H2W6 279 aaKnown RBP15.21■□□□□ 0.03
USP47-207ENST00000527733 CCSER2Q9H7U1 834 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 GNPTGQ9UJJ9 305 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 ARAP2Q8WZ64 1704 aa15.21■□□□□ 0.03
USP47-207ENST00000527733 RNF103-CHMP3A0A140T963 221 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 C9IYK1 514 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 ZBTB14O43829 449 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 DGKIO75912 1065 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 THRAP10827 490 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 RAP1GDS1P52306 607 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 PLK1P53350 603 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 MLLT6P55198 1093 aaPredicted RBP15.21■□□□□ 0.02
USP47-207ENST00000527733 PACS1Q6VY07 963 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 MRPL10Q7Z7H8 261 aaKnown RBP15.21■□□□□ 0.02
USP47-207ENST00000527733 GPSM1Q86YR5 675 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 SLC41A1Q8IVJ1 513 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 PTCD2Q8WV60 388 aaKnown RBP15.21■□□□□ 0.02
USP47-207ENST00000527733 GKN1Q9NS71 199 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 ARHGAP26Q9UNA1 814 aa15.21■□□□□ 0.02
USP47-207ENST00000527733 KIAA0100Q14667 2235 aaKnown RBP15.21■□□□□ 0.02
USP47-207ENST00000527733 MEIS3P2A8K0S8 358 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 GRK3P35626 688 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 TCEAL1Q15170 157 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 ZNF572Q7Z3I7 529 aaPredicted RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 SPATA22Q8NHS9 363 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 RFWD2Q8NHY2 731 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 FAM126AQ9BYI3 521 aaPredicted RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 DUS2Q9NX74 493 aaKnown RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 EVLQ9UI08 416 aaPredicted RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 MYO5AQ9Y4I1 1855 aaKnown RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 LAMB2P55268 1798 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 A0A1W2PQ67 120 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 CATP04040 527 aaKnown RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 SLC20A2Q08357 652 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 LYPLAL1Q5VWZ2 237 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 TMC5Q6UXY8 1006 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 CHST9Q7L1S5 443 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 RD3Q7Z3Z2 195 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 RAD9AQ99638 391 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 CNTN6Q9UQ52 1028 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 CD3EAPO15446 510 aaKnown RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 MAPK1P28482 360 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 GPR15P49685 360 aa15.2■□□□□ 0.02
USP47-207ENST00000527733 SLC25A11Q02978 314 aaKnown RBP15.2■□□□□ 0.02
USP47-207ENST00000527733 HSPA14Q0VDF9 509 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms