RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TCAF2A6NFQ2 919 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ACOT8O14734 319 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 TSPAN1O60635 241 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ADSLP30566 484 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 PURAQ00577 322 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 SLC12A1Q13621 1099 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ZNF460Q14592 562 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ZNF484Q5JVG2 852 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 PIGZQ86VD9 579 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 SNRNP27Q8WVK2 155 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 LPPQ93052 612 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 NXF3Q9H4D5 531 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 LRRC4Q9HBW1 653 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 XPR1Q9UBH6 696 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 RSL24D1Q9UHA3 163 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 GTF2IRD1Q9UHL9 959 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 PIN4Q9Y237 131 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 MAGEB16A2A368 324 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 C7orf72A4D263 438 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 SLC22A2O15244 555 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 DLX3O60479 287 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 TADA2AO75478 443 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 GPC4O75487 556 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 CDH2P19022 906 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-208ENST00000527323 NFKB1P19838 968 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 TPI1P60174 286 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 APOFQ13790 326 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 LPCAT2Q7L5N7 544 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 SLC7A14Q8TBB6 771 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 RDH11Q8TC12 318 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 HSFY1Q96LI6 401 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 ANLNQ9NQW6 1124 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 STAP1Q9ULZ2 295 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 ANKRD6Q9Y2G4 727 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 CEPT1Q9Y6K0 416 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 A0A0J9YVX5 310 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 E7ENX8 843 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 FAM72CH0Y354 149 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 HNRNPLP14866 589 aaKnown RBP eCLIP12.64□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF26P17031 533 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-208ENST00000527323 NPY2RP49146 381 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 NDUFV1P49821 464 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 HK2P52789 917 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 PRKAA2P54646 552 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 PRAMEP78395 509 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 RALGDSQ12967 914 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 TRIM25Q14258 630 aaKnown RBP12.64□□□□□ -0.39
CAPN1-208ENST00000527323 HERC3Q15034 1050 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 PAN2Q504Q3 1202 aaKnown RBP12.64□□□□□ -0.39
CAPN1-208ENST00000527323 AGKQ53H12 422 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF618Q5T7W0 954 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 FAM72AQ5TYM5 149 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 SYPL2Q5VXT5 272 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 FAM72DQ6L9T8 149 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 FAM72BQ86X60 149 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 MIPOL1Q8TD10 442 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 USP33Q8TEY7 942 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 NXNL1Q96CM4 212 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 FAM210AQ96ND0 272 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 CIB1Q99828 191 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 IL22Q9GZX6 179 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 CCDC167Q9P0B6 97 aa12.64□□□□□ -0.39
CAPN1-208ENST00000527323 MGAMO43451 1857 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 PEX14O75381 377 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 STAMBPO95630 424 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 JCHAINP01591 159 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 CYBAP13498 195 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 POU5F1BQ06416 359 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 CTBP1Q13363 440 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 PAFAH1B3Q15102 231 aaKnown RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 LRRC8EQ6NSJ5 796 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 ZC3HC1Q86WB0 502 aaKnown RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 RNF135Q8IUD6 432 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 GRIN3AQ8TCU5 1115 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 GAB3Q8WWW8 586 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 LPGAT1Q92604 370 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF512Q96ME7 567 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 RNF11Q9Y3C5 154 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 HEMK1Q9Y5R4 338 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 RBM47A0AV96 593 aaKnown RBP12.63□□□□□ -0.39
CAPN1-208ENST00000527323 TRPC5OSA6NMA1 111 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 H6PDO95479 791 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 F2P00734 622 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 INHAP05111 366 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 SBK3P0C264 359 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 NOS2P35228 1153 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 THPOP40225 353 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 HADHAP40939 763 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 GRM5P41594 1212 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 STX5Q13190 355 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 HERC6Q8IVU3 1022 aa12.63□□□□□ -0.39
CAPN1-208ENST00000527323 SIX6OS1Q8N1H7 587 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms