RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 GALNT15Q8N3T1 639 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 STT3BQ8TCJ2 826 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 NEK9Q8TD19 979 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 TBC1D22AQ8WUA7 517 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 TRIB2Q92519 343 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 HERC2P3Q9BVR0 1158 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 CHPF2Q9P2E5 772 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 NLKQ9UBE8 527 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 LOC105371045A0A1W2PR82 267 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 LDLRP01130 860 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 NBPF7P0C2Y1 421 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-210ENST00000525878 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 SERPINF1P36955 418 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 BRWD1-AS2P59051 145 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 ECT2LQ008S8 904 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 DMP1Q13316 513 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-210ENST00000525878 PFKFB4Q16877 469 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 KLHL24Q6TFL4 600 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 C3orf49Q96BT1 292 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 LRFN5Q96NI6 719 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 ATP8A2Q9NTI2 1148 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 KCND3Q9UK17 655 aa4.16□□□□□ -1.74
CSDE1-210ENST00000525878 FAM172BPA6NC97 362 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 STRNO43815 780 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 METTL18O95568 372 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 CTPS1P17812 591 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 PDIA3P30101 505 aaKnown RBP4.15□□□□□ -1.75
CSDE1-210ENST00000525878 CENPAP49450 140 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF132P52740 706 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 SLC18A2Q05940 514 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 THOC5Q13769 683 aaKnown RBP4.15□□□□□ -1.75
CSDE1-210ENST00000525878 KLHL17Q6TDP4 642 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 GDPD4Q6W3E5 623 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 RASGRP2Q7LDG7 609 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 KLHDC8BQ8IXV7 354 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 IL17RCQ8NAC3 791 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 ZNF527Q8NB42 609 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 SETD9Q8NE22 299 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 ZMIZ2Q8NF64 920 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 FEM1CQ96JP0 617 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 TNIP3Q96KP6 325 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 SMARCAL1Q9NZC9 954 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 OR6C3Q9NZP0 311 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 HDAC6Q9UBN7 1215 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 PCDHAC2Q9Y5I4 1007 aa4.15□□□□□ -1.75
CSDE1-210ENST00000525878 A0A087WV62 115 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 HNRNPCL2B2RXH8 293 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 P2RY10O00398 339 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 CBX6O95503 412 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 PNPLA4P41247 253 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 NEK3P51956 506 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 PICALMQ13492 652 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 BYSLQ13895 437 aaKnown RBP4.14□□□□□ -1.75
CSDE1-210ENST00000525878 FCN2Q15485 313 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 PLEKHO1Q53GL0 409 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-210ENST00000525878 DENND6AQ8IWF6 608 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 MB21D2Q8IYB1 491 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-210ENST00000525878 FAM186BQ8IYM0 893 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 MAB21L3Q8N8X9 362 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 FSIP1Q8NA03 581 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 LNX1Q8TBB1 728 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-210ENST00000525878 DUX3Q96PT4 197 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 PLEKHA2Q9HB19 425 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 ARFGAP3Q9NP61 516 aa4.14□□□□□ -1.75
CSDE1-210ENST00000525878 A0A1B0GVY2 172 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 WNT9BO14905 357 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 ZG16O60844 167 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 KDM4BO94953 1096 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 CLDN14O95500 239 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 CRYAAP02489 173 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 CSF1P09603 554 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 DHRS4L1P0CG22 281 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 TTKP33981 857 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 PTPN9P43378 593 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 TAF6P49848 677 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 ARHGAP8P85298 464 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 ZBTB17Q13105 803 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 CHAF1AQ13111 956 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-210ENST00000525878 PDCLQ13371 301 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 CAPSQ13938 189 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 IL13RA2Q14627 380 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 SMAD1Q15797 465 aaKnown RBP4.13□□□□□ -1.75
CSDE1-210ENST00000525878 ME3Q16798 604 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 AP5B1Q2VPB7 878 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 ACCSLQ4AC99 568 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 GGT6Q6P531 493 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 TRMT1LQ7Z2T5 733 aaKnown RBP4.13□□□□□ -1.75
CSDE1-210ENST00000525878 CCDC117Q8IWD4 279 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-210ENST00000525878 USP13Q92995 863 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-210ENST00000525878 MTBPQ96DY7 904 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 OR1F2PQ96R84 312 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 MMTAG2Q9BU76 263 aaKnown RBP4.13□□□□□ -1.75
CSDE1-210ENST00000525878 ANKRD10Q9NXR5 420 aa4.13□□□□□ -1.75
CSDE1-210ENST00000525878 SHROOM4Q9ULL8 1493 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 SKAP2O75563 359 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-210ENST00000525878 IL1AP01583 271 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 LINC00271P0C7V0 271 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 PHEXP78562 749 aa4.12□□□□□ -1.75
CSDE1-210ENST00000525878 RUNDC3AQ59EK9 446 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms