RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 NTN1O95631 604 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 IL1AP01583 271 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 LCKP06239 509 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 HOXD9P28356 352 aaPredicted RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 TYK2P29597 1187 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 AVPR2P30518 371 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 CCT4P50991 539 aaKnown RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 CFHR1Q03591 330 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 IL13RA2Q14627 380 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 PGM5Q15124 567 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 TTC39AQ5SRH9 613 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 C10orf25Q5T742 122 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 CCDC70Q6NSX1 233 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 MMS22LQ6ZRQ5 1243 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 MRPL10Q7Z7H8 261 aaKnown RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.17□□□□□ -1.74
CD44-219ENST00000525685 NRACQ8N912 160 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 SLC44A5Q8NCS7 719 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 C16orf52Q8NHV5 167 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 C2CD4CQ8TF44 421 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 RNFT2Q96EX2 444 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 TBATAQ96M53 351 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 GATA5Q9BWX5 397 aaPredicted RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 NPLQ9BXD5 320 aaPredicted RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 GPR63Q9BZJ6 419 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 MROH8Q9H579 483 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 TXNRD2Q9NNW7 524 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 TLR8Q9NR97 1041 aaKnown RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 SAGE1Q9NXZ1 904 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 IFT80Q9P2H3 777 aaPredicted RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 CNOT7Q9UIV1 285 aaKnown RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 ANAPC4Q9UJX5 808 aa4.17□□□□□ -1.74
CD44-219ENST00000525685 COL5A2P05997 1499 aaPredicted RBP4.17□□□□□ -1.74
CD44-219ENST00000525685 CAMTA1Q9Y6Y1 1673 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 PEAK1Q9H792 1746 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 RGS12O14924 1447 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 SH2D7A6NKC9 451 aaPredicted RBP4.16□□□□□ -1.74
CD44-219ENST00000525685 AGR2O95994 175 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 ARSAP15289 507 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 MVDP53602 400 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 TLE2Q04725 743 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 CHRNDQ07001 517 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD44-219ENST00000525685 MIDNQ504T8 468 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 C6orf10Q5SRN2 563 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 MAP3K21Q5TCX8 1036 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 ZNF772Q68DY9 489 aaPredicted RBP4.16□□□□□ -1.74
CD44-219ENST00000525685 AADACL2Q6P093 401 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 SLC22A25Q6T423 547 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 ADGRG6Q86SQ4 1221 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 DDIASQ8IXT1 998 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 FAM185AQ8N0U4 392 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 ESX1Q8N693 406 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 DNAAF1Q8NEP3 725 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 PIMREGQ9BSJ6 248 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 TAOK3Q9H2K8 898 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 TTC12Q9H892 705 aaPredicted RBP4.16□□□□□ -1.74
CD44-219ENST00000525685 TMEM248Q9NWD8 314 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 CDH22Q9UJ99 828 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 SLC13A4Q9UKG4 626 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 CRYL1Q9Y2S2 319 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 RGPD5Q99666 1765 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 CDK12Q9NYV4 1490 aaPredicted RBP4.16□□□□□ -1.74
CD44-219ENST00000525685 THSD7AQ9UPZ6 1657 aa4.16□□□□□ -1.74
CD44-219ENST00000525685 LY6G6EA0A0G2JKS1 128 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 KIR2DS5A0A0G2JLQ3 304 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 CCDC196A0A1B0GTZ2 297 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 OR6C68A6NDL8 312 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 FOXO6A8MYZ6 492 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 KIR2DS3K7RE56 304 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 KIF1CO43896 1103 aaKnown RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 DHX16O60231 1041 aaKnown RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 TLR2O60603 784 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 SYF2O95926 243 aaKnown RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 PRF1P14222 555 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 HNF1BP35680 557 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 PAFAH1B1P43034 410 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 FOXG1P55316 489 aaPredicted RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 RHAGQ02094 409 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 TDGQ13569 410 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 RBMS2Q15434 407 aaKnown RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 GPR68Q15743 365 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 ZNF260Q3ZCT1 412 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 KIAA1755Q5JYT7 1200 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 WDR45BQ5MNZ6 344 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 SH2D4BQ5SQS7 431 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 MANEAQ5SRI9 462 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 AAGABQ6PD74 315 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 DEF8Q6ZN54 512 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 LRRC8DQ7L1W4 858 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 RTL10Q7L3V2 364 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 IRF2BP2Q7Z5L9 587 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 PIP4P1Q86T03 277 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 CPOQ8IVL8 374 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 SCAIQ8N9R8 606 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 CMASQ8NFW8 434 aaPredicted RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 HERVK_113Q902F9 699 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 CNOT9Q92600 299 aaKnown RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 KAT2AQ92830 837 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 CLMNQ96JQ2 1002 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms