RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 NHEJ1Q9H9Q4 299 aaPredicted RBP17.77■□□□□ 0.44
NR1H3-228ENST00000525441 RCOR3Q9P2K3 495 aaPredicted RBP17.77■□□□□ 0.44
NR1H3-228ENST00000525441 FADS3Q9Y5Q0 445 aa17.77■□□□□ 0.44
NR1H3-228ENST00000525441 PLXNA2O75051 1894 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 NEMP1O14524 444 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 WNT9AO14904 365 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 SLC31A1O15431 190 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 YKT6O15498 198 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 TSPAN6O43657 245 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 PCDHGA12O60330 932 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 PALMO75781 387 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 PROSCO94903 275 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 HNRNPA2B1P22626 353 aaKnown RBP17.76■□□□□ 0.43
NR1H3-228ENST00000525441 PMLP29590 882 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 SERPINB6P35237 376 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 NXPH1P58417 271 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 SIM1P81133 766 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-228ENST00000525441 RFTN1Q14699 578 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-228ENST00000525441 INAVAQ3KP66 663 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 OXR1Q8N573 874 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 NPWQ8N729 165 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 CSPG4P5Q96PW8 444 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 ELF4Q99607 663 aaPredicted RBP17.76■□□□□ 0.43
NR1H3-228ENST00000525441 CHP1Q99653 195 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 PACSIN1Q9BY11 444 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 CPEB1Q9BZB8 566 aaKnown RBP17.76■□□□□ 0.43
NR1H3-228ENST00000525441 PCDH18Q9HCL0 1135 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 LHX3Q9UBR4 397 aa17.76■□□□□ 0.43
NR1H3-228ENST00000525441 IPO11Q9UI26 975 aaKnown RBP17.76■□□□□ 0.43
NR1H3-228ENST00000525441 A0A1B0GTQ1 180 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 SPAARA0A1B0GVQ0 90 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 KCNK3O14649 394 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 PRLRP16471 622 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 AMPD1P23109 780 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 ARRB1P49407 418 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-228ENST00000525441 CDH6P55285 790 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 IL10RBQ08334 325 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 TBX2Q13207 712 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-228ENST00000525441 TRIP6Q15654 476 aaKnown RBP17.75■□□□□ 0.43
NR1H3-228ENST00000525441 TMEM259Q4ZIN3 620 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 SEL1L3Q68CR1 1132 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 TXNRD3NBQ6F5E7 133 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 DBX2Q6ZNG2 339 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 NETO2Q8NC67 525 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 KLK6Q92876 244 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 KLHDC7BQ96G42 594 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 CAMK1GQ96NX5 476 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 CINPQ9BW66 212 aaPredicted RBP17.75■□□□□ 0.43
NR1H3-228ENST00000525441 ERVMER34-1Q9H9K5 563 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 DKK3Q9UBP4 350 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 ANGPTL2Q9UKU9 493 aa17.75■□□□□ 0.43
NR1H3-228ENST00000525441 KRT7P08729 469 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 XPAP23025 273 aaPredicted RBP17.74■□□□□ 0.43
NR1H3-228ENST00000525441 MAN1A1P33908 653 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 GRK6P43250 576 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 CSNK1DP48730 415 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 RENBPP51606 427 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 SUOXP51687 545 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 SGCGQ13326 291 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 CFAP58Q5T655 872 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 TMCO4Q5TGY1 634 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 TTC7BQ86TV6 843 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 TMEM145Q8NBT3 493 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 FAM174AQ8TBP5 190 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 HCAR2Q8TDS4 363 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 RHBDD1Q8TEB9 315 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 EXOC2Q96KP1 924 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 ZNF599Q96NL3 588 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 TUBGCP5Q96RT8 1024 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 CDC6Q99741 560 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 SLC17A9Q9BYT1 436 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 SPTLC3Q9NUV7 552 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 SEPT3Q9UH03 358 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 PCOLCE2Q9UKZ9 415 aa17.74■□□□□ 0.43
NR1H3-228ENST00000525441 ZFR2Q9UPR6 939 aaKnown RBP17.74■□□□□ 0.43
NR1H3-228ENST00000525441 GJC1P36383 396 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 ABL2P42684 1182 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 SHC2P98077 582 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 PDK2Q15119 407 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 MAP7D3Q8IWC1 876 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 RHOT2Q8IXI1 618 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 KCTD6Q8NC69 237 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 FAM71BQ8TC56 605 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 NSMCE1Q8WV22 266 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 TSC1Q92574 1164 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 ZNF641Q96N77 438 aaPredicted RBP17.73■□□□□ 0.43
NR1H3-228ENST00000525441 MYOCQ99972 504 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 ATP13A3Q9H7F0 1226 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 INTUQ9ULD6 942 aa17.73■□□□□ 0.43
NR1H3-228ENST00000525441 TPRP12270 2363 aaKnown RBP17.72■□□□□ 0.43
NR1H3-228ENST00000525441 AREL1O15033 823 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 INSIG1O15503 277 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 CBFA2T3O75081 653 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 TRIM16O95361 564 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 THEGLP0DJG4 465 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 FAM193AP78312 1265 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 IL9RQ01113 521 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 NSUN2Q08J23 767 aaKnown RBP eCLIP17.72■□□□□ 0.43
NR1H3-228ENST00000525441 FOXC1Q12948 553 aa17.72■□□□□ 0.43
NR1H3-228ENST00000525441 PRAMEF14Q5SWL7 426 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms