RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TCRBV21S2A2A0A5A6 115 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 BCLAF3A2AJT9 711 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 PGRMC1O00264 195 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 CES2O00748 559 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 KCNN4O15554 427 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 TIMM44O43615 452 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 MT-CYBP00156 380 aaPredicted RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 ASLP04424 464 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 ATP5BP06576 529 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 SRPRAP08240 638 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 PDHA1P08559 390 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 ALADP13716 330 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 HOXB2P14652 356 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 ZFXP17010 805 aaPredicted RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 TCP1P17987 556 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 NFKB1P19838 968 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 PSMB4P28070 264 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 AVPR2P30518 371 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 SERPINB6P35237 376 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 RPL22P35268 128 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 DRD3P35462 400 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 COILP38432 576 aaPredicted RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 GRIA1P42261 906 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 RPS9P46781 194 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 CCNHP51946 323 aaPredicted RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 RHOAP61586 193 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 IFI35P80217 286 aaPredicted RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 SPARCL1Q14515 664 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 EIF4HQ15056 248 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 PDK1Q15118 436 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 TRADDQ15628 312 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 CYP1B1Q16678 543 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 MYLK3Q32MK0 819 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 TEX44Q53QW1 395 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 CARD16Q5EG05 197 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 CCDC181Q5TID7 509 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 HEATR6Q6AI08 1181 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 NCEH1Q6PIU2 408 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 KDELC1Q6UW63 502 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 SERPINA13PQ6UXR4 307 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 KDELC2Q7Z4H8 507 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 BMP8AQ7Z5Y6 402 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 SRLQ86TD4 932 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 CAMK1DQ8IU85 385 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 MMAAQ8IVH4 418 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 SUGP1Q8IWZ8 645 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 KLHL7Q8IXQ5 586 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 DEPDC4Q8N2C3 294 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 FBXL6Q8N531 539 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 AADATQ8N5Z0 425 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 DTWD2Q8NBA8 298 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 NOA1Q8NC60 698 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 MDGA1Q8NFP4 955 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 GRIN3AQ8TCU5 1115 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 HTR3CQ8WXA8 447 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 RLN3Q8WXF3 142 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 MAGOHBQ96A72 148 aaKnown RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 ACDQ96AP0 544 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 TADA1Q96BN2 335 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 SHDQ96IW2 340 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 MRGPRX1Q96LB2 322 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 RBM15Q96T37 977 aaKnown RBP eCLIP6.57□□□□□ -1.36
CD44-214ENST00000525211 MGME1Q9BQP7 344 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 TRIM51Q9BSJ1 452 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 LRFN3Q9BTN0 628 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 OSBPL6Q9BZF3 934 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 TPSD1Q9BZJ3 242 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 MFSD1Q9H3U5 465 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 RETREG1Q9H6L5 497 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 GLOD4Q9HC38 313 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 HECAQ9UBI9 543 aaPredicted RBP6.57□□□□□ -1.36
CD44-214ENST00000525211 GGT7Q9UJ14 662 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 SLC25A13Q9UJS0 675 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 ITM2BQ9Y287 266 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 PCDHGC4Q9Y5F7 938 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 MRFAP1Q9Y605 127 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 USP34Q70CQ2 3546 aa6.57□□□□□ -1.36
CD44-214ENST00000525211 ZNF318Q5VUA4 2279 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 KMT2EQ8IZD2 1858 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 EDDM13A0A1B0GTR0 161 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ZSCAN5CA6NGD5 496 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 HACD1B0YJ81 288 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 KRIT1O00522 736 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 TRAFD1O14545 582 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 MCF2LO15068 1137 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 MID1O15344 667 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 TP73O15350 636 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 LEFTY1O75610 366 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 TIMP2P16035 220 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 MX2P20592 715 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 BCKDHBP21953 392 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 IVDP26440 423 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 CHRNA3P32297 505 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 CHRNA4P43681 627 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 MMP13P45452 471 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PSMD8P48556 350 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 NR2C2P49116 596 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 FNTBP49356 437 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 VPS41P49754 854 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 SCNN1BP51168 640 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms