RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ASTE1Q2TB18 679 aaPredicted RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 ZNF750Q32MQ0 723 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 GLE1Q53GS7 698 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 C19orf54Q5BKX5 351 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 HERC4Q5GLZ8 1057 aaPredicted RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 UBAP2Q5T6F2 1119 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 PLA2G4FQ68DD2 849 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 ARHGAP17Q68EM7 881 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 NOTUMQ6P988 496 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 MOXD1Q6UVY6 613 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 TRIM72Q6ZMU5 477 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 PIK3AP1Q6ZUJ8 805 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 C1orf186Q6ZWK4 172 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 CCDC80Q76M96 950 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 BMP8AQ7Z5Y6 402 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 CAMKMTQ7Z624 323 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 SGMS1Q86VZ5 419 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 FBXO11Q86XK2 927 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 PSTKQ8IV42 348 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 DENND6AQ8IWF6 608 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 TRIM48Q8IWZ4 208 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 MCEMP1Q8IX19 187 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 ZNF679Q8IYX0 411 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 CLYBLQ8N0X4 340 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 MMP21Q8N119 569 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 OR7G3Q8NG95 312 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 OR7D4Q8NG98 312 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 GLMPQ8WWB7 406 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 SLAMF9Q96A28 289 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 PTERQ96BW5 349 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 C19orf60Q96EN9 201 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 FBXL20Q96IG2 436 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 ATP6V1G3Q96LB4 118 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 PRICKLE1Q96MT3 831 aaPredicted RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 RAD9AQ99638 391 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 HNRNPABQ99729 332 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 CAPS2Q9BXY5 557 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 GLIS2Q9BZE0 524 aaPredicted RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 TRIM2Q9C040 744 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 POLR1EQ9GZS1 481 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 HAPLN2Q9GZV7 340 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 IQCGQ9H095 443 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 LRRC40Q9H9A6 602 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 FBRSL1Q9HCM7 1045 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 TLR8Q9NR97 1041 aaKnown RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 LANCL2Q9NS86 450 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 DNAJC11Q9NVH1 559 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 RLIMQ9NVW2 624 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 SMPD3Q9NY59 655 aaPredicted RBP4.58□□□□□ -1.68
CD44-213ENST00000525209 GDE1Q9NZC3 331 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 KCMF1Q9P0J7 381 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 MYOTQ9UBF9 498 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 MALT1Q9UDY8 824 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 FBXW2Q9UKT8 454 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 OSGIN2Q9Y236 505 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 RWDD3Q9Y3V2 267 aa4.58□□□□□ -1.68
CD44-213ENST00000525209 CUL7Q14999 1698 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 WDR97A6NE52 1622 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 DIP2BQ9P265 1576 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ABCC10Q5T3U5 1492 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KIF7Q2M1P5 1343 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KIF16BQ96L93 1317 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 LOC102723996A0A087X1L8 192 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 TEX13CA0A0J9YWL9 993 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 LOC100653049A0A140TA62 436 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 A6NL46 340 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 PRR5-ARHGAP8B1AHC4 643 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 NDUFS8O00217 210 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 E2F3O00716 465 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 PLSCR1O15162 318 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ADCY6O43306 1168 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 PRDM1O75626 825 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KRT34O76011 436 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ALX3O95076 343 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 SCAF4O95104 1147 aaKnown RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 TIAF1O95411 115 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CBX7O95931 251 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KRT6BP04259 564 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 S100A6P06703 90 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ABHD2P08910 425 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 SBK3P0C264 359 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ACP5P13686 325 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 ZNF8P17098 575 aaPredicted RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 MYF6P23409 242 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 PTPN4P29074 926 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 HOXA13P31271 388 aaPredicted RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 SFNP31947 248 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CTNNB1P35222 781 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 WNT5AP41221 380 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 KRT6CP48668 564 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 AP3M2P53677 418 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 UBE2HP62256 183 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 SP2Q02086 613 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 TAP2Q03519 686 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 GFPT1Q06210 699 aaPredicted RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 SLFN5Q08AF3 891 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 CCDC173Q0VFZ6 552 aa4.57□□□□□ -1.68
CD44-213ENST00000525209 DBPQ10586 325 aaPredicted RBP4.57□□□□□ -1.68
CD44-213ENST00000525209 NFATC3Q12968 1075 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms