RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	MRPL57	Q9BQC6	102 aa	Known RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	MEAF6	Q9HAF1	191 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	ANLN	Q9NQW6	1124 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	STAP1	Q9ULZ2	295 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	PLXNA1	Q9UIW2	1896 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	TMEM221	A6NGB7	291 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	TMEM233	B4DJY2	109 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	SOCS2	O14508	198 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	GIPC1	O14908	333 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	DAB1	O75553	588 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	ARF4	P18085	180 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	ATP5F1	P24539	256 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	NAA20	P61599	178 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	PLOD1	Q02809	727 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CYP2R1	Q6VVX0	501 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	LINC00523	Q86TU6	105 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	DDHD1	Q8NEL9	900 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	SPPL2B	Q8TCT7	592 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	ZUFSP	Q96AP4	578 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	FAM149B1	Q96BN6	582 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	ROPN1L	Q96C74	230 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CPB2	Q96IY4	423 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CCDC68	Q9H2F9	335 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	PALMD	Q9NP74	551 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CD320	Q9NPF0	282 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	DERA	Q9Y315	318 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	FBP2	O00757	339 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	NRP2	O60462	931 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	SUPT3H	O75486	399 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	GPC4	O75487	556 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	TIPRL	O75663	272 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	F7	P08709	466 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	PDGFRB	P09619	1106 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CKMT2	P17540	419 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	VARS	P26640	1264 aa	Known RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	DCK	P27707	260 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	AIF1	P55008	147 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	INTS6L	Q5JSJ4	861 aa	Known RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CNTN4	Q8IWV2	1026 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	DEFB106A	Q8N104	65 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	LRRC52	Q8N7C0	313 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	PCYOX1L	Q8NBM8	494 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	DCUN1D5	Q9BTE7	237 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	C9orf16	Q9BUW7	83 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	ADI1	Q9BV57	179 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	KIFC1	Q9BW19	673 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	POMK	Q9H5K3	350 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CXorf21	Q9HAI6	301 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	CCDC167	Q9P0B6	97 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141	TMEM9	Q9P0T7	183 aa		10.37	□□□□□ -0.75
SPIDR-225	ENST00000524141		A0A087X1B8	175 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SOWAHB	A6NEL2	793 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	AQP12B	A6NM10	295 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	BBIP1	A8MTZ0	92 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	PLOD2	O00469	737 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	ZBTB24	O43167	697 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	PSMD3	O43242	534 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NOL3	O60936	208 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	C22orf31	O95567	290 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NMBR	P28336	390 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	ADORA2B	P29275	332 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	LRPAP1	P30533	357 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NOS2	P35228	1153 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	AVPR1A	P37288	418 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	GRIA3	P42263	894 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	TKTL1	P51854	596 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC5A3	P53794	718 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	MPP1	Q00013	466 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	PRPSAP1	Q14558	356 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	INPP5A	Q14642	412 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	DCAF6	Q58WW2	860 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	C8orf82	Q6P1X6	216 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SLC41A1	Q8IVJ1	513 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	AQP12A	Q8IXF9	295 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NETO2	Q8NC67	525 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	NT5C3B	Q969T7	300 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SPATA33	Q96N06	139 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	GPR78	Q96P69	363 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	RHOBTB2	Q9BYZ6	727 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	PAIP1	Q9H074	479 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	SMOX	Q9NWM0	555 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	ITGB1BP2	Q9UKP3	347 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	BRWD3	Q6RI45	1802 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141		A0A087WZ62	844 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	ZNF839	A8K0R7	811 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	BOLA2-SMG1P6	H3BVE0	249 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	IL10	P22301	178 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	ATP4B	P51164	291 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	C21orf59	P57076	290 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	ZNF280A	P59817	542 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	PFKP	Q01813	784 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	MERTK	Q12866	999 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	TSTD2	Q5T7W7	516 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	PRMT9	Q6P2P2	845 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	EEPD1	Q7L9B9	569 aa		10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	TXNDC5	Q8NBS9	432 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-225	ENST00000524141	HMGCLL1	Q8TB92	370 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms