RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	SYNJ2BP-COX16	A0A087WUM0	186 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ARHGEF37	A1IGU5	675 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	C2orf81	A6NN90	581 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	FAM90A27P	A6NNH2	459 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	SCD	O00767	359 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	FOXP2	O15409	715 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	TNFSF14	O43557	240 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	BUB1B	O60566	1050 aa	Predicted RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	KLHL41	O60662	606 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	USO1	O60763	962 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	GUCA1C	O95843	209 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	C4BPA	P04003	597 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZNF883	P0CG24	379 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	SKIL	P12757	684 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	DARS	P14868	501 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	JUP	P14923	745 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	FAH	P16930	419 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	IGFBP6	P24592	240 aa	Predicted RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ACTN2	P35609	894 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	UQCRFS1	P47985	274 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	SLC12A2	P55011	1212 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	IL2	P60568	153 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	KRT85	P78386	507 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	AKAP17A	Q02040	695 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	AP1B1	Q10567	949 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	TEAD2	Q15562	447 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	SLC35G1	Q2M3R5	365 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	WSCD2	Q2TBF2	565 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ARL13B	Q3SXY8	428 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	MMEL1	Q495T6	779 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	KRTCAP3	Q53RY4	240 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	BROX	Q5VW32	411 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	KAZN	Q674X7	775 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	CLEC17A	Q6ZS10	378 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	SLC9B2	Q86UD5	537 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	CCAR2	Q8N163	923 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZNF619	Q8N2I2	560 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	SMARCC2	Q8TAQ2	1214 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	CHTF18	Q8WVB6	975 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	MIB2	Q96AX9	1013 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	CNDP2	Q96KP4	475 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	FAM20A	Q96MK3	541 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	PAAF1	Q9BRP4	392 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	CCDC94	Q9BW85	323 aa	Predicted RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	CCDC68	Q9H2F9	335 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	TM7SF3	Q9NS93	570 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	OLA1	Q9NTK5	396 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	THG1L	Q9NWX6	298 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	HPF1	Q9NWY4	346 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	IRAK4	Q9NWZ3	460 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	SIRT5	Q9NXA8	310 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	GRHPR	Q9UBQ7	328 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZMAT5	Q9UDW3	170 aa	Known RBP	5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	TBC1D29	Q9UFV1	150 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	LAMP5	Q9UJQ1	280 aa		5.37	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZNF638	Q14966	1978 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	IGKV6D-21	A0A0A0MT36	114 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	MYOCOS	A0A1B0GUC4	107 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636		A0A1W2PPH5	198 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	VPS37C	A5D8V6	355 aa	Predicted RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	KCNK3	O14649	394 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	HOXC11	O43248	304 aa	Predicted RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ULK1	O75385	1050 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	RECQL4	O94761	1208 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	LETM1	O95202	739 aa	Predicted RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	GOSR1	O95249	250 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	PRAMEF12	O95522	483 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	CSTB	P04080	98 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	PTPN2	P17706	415 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TNFSF4	P23510	183 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ADRA1B	P35368	520 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	HADHA	P40939	763 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	HNF4A	P41235	474 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TUB	P50607	506 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	GPC3	P51654	580 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	KIF11	P52732	1056 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	POLR2F	P61218	127 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	PHC1	P78364	1004 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZNF33A	Q06730	810 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	CCDC15	Q0P6D6	951 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	GRSF1	Q12849	480 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	FAP	Q12884	760 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	PPA1	Q15181	289 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TAF5	Q15542	800 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	UBXN11	Q5T124	520 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	HES3	Q5TGS1	186 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	MCTP1	Q6DN14	999 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	RFX8	Q6ZV50	586 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	PLPPR4	Q7Z2D5	763 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	MRPL10	Q7Z7H8	261 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	SFTPA1	Q8IWL2	248 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	DHX40	Q8IX18	779 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	RBM12B	Q8IXT5	1001 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TBC1D21	Q8IYX1	336 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZNF540	Q8NDQ6	660 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms