RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ZNF33AQ06730 810 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 SMAD2Q15796 467 aaKnown RBP9.46□□□□□ -0.89
SDCBP-212ENST00000523483 NAPEPLDQ6IQ20 393 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 EMBQ6PCB8 327 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 PRPF39Q86UA1 669 aaKnown RBP9.46□□□□□ -0.89
SDCBP-212ENST00000523483 ZNF557Q8N988 423 aaPredicted RBP9.46□□□□□ -0.89
SDCBP-212ENST00000523483 FBXO36Q8NEA4 188 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 CDC42EP4Q9H3Q1 356 aaKnown RBP9.46□□□□□ -0.89
SDCBP-212ENST00000523483 MARK1Q9P0L2 795 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 CA14Q9ULX7 337 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 ERVW-1Q9UQF0 538 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 FAM50BQ9Y247 325 aa9.46□□□□□ -0.89
SDCBP-212ENST00000523483 AP2A1O95782 977 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 IGSF6O95976 241 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 APODP05090 189 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 EPHX1P07099 455 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 H2AFXP16104 143 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-212ENST00000523483 OPRD1P41143 372 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 MAGEA4P43358 317 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 GALK1P51570 392 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 PMS2P54278 862 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 SLC12A1Q13621 1099 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 COL19A1Q14993 1142 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 PTPRRQ15256 657 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 BEND6Q5SZJ8 279 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-212ENST00000523483 C22orf39Q6P5X5 142 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 DPY19L3Q6ZPD9 716 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 TMC3Q7Z5M5 1100 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 ZCCHC9Q8N567 271 aaKnown RBP9.46□□□□□ -0.9
SDCBP-212ENST00000523483 AENQ8WTP8 325 aaKnown RBP9.46□□□□□ -0.9
SDCBP-212ENST00000523483 SEC14L1Q92503 715 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 FCRL5Q96RD9 977 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 P2RY13Q9BPV8 354 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 TBL1YQ9BQ87 522 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 LRRC40Q9H9A6 602 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 BFARQ9NZS9 450 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 RAI2Q9Y5P3 530 aa9.46□□□□□ -0.9
SDCBP-212ENST00000523483 CTPS1P17812 591 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SSTR1P30872 391 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SLCO1A2P46721 670 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CCNHP51946 323 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SULT2A1Q06520 285 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 UAP1Q16222 522 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 C4orf22Q6V702 233 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 ETFBKMTQ8IXQ9 262 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SH2D3CQ8N5H7 860 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CHST14Q8NCH0 376 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 FLCNQ8NFG4 579 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 UCMAQ8WVF2 138 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF599Q96NL3 588 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 FBXL21Q9UKT6 434 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 ZDBF2Q9HCK1 2354 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 GOLGA8KD6RF30 607 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SPECC1L-ADORA2AF8WAN1 911 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 GOLGA8TH3BQL2 631 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 KPNA3O00505 521 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 PDHA1P08559 390 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SLC8A1P32418 973 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CTHP32929 405 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SNRPD1P62314 119 aaKnown RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 TMPRSS15P98073 1019 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 BCL2L1Q07817 233 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CASP8Q14790 479 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 OTUD6BQ8N6M0 293 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF513Q8N8E2 541 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 OR2AP1Q8NGE2 309 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 IMP4Q96G21 291 aaKnown RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 GORASP1Q9BQQ3 440 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SLC2A11Q9BYW1 496 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 ZC3H7BQ9UGR2 993 aaKnown RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CCL22O00626 93 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 PAPLNO95428 1278 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CDK18Q07002 472 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SLC29A2Q14542 456 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 IHHQ14623 411 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 INO80DQ53TQ3 878 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 EGFLAMQ63HQ2 1017 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CAND1Q86VP6 1230 aaKnown RBP9.45□□□□□ -0.9
SDCBP-212ENST00000523483 CTAGE3PQ8IX95 158 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 ARRDC2Q8TBH0 407 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 MRGPRX2Q96LB1 330 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 MGME1Q9BQP7 344 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 RETREG1Q9H6L5 497 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 SYBUQ9NX95 663 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 LHX3Q9UBR4 397 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 KNL1Q8NG31 2342 aa9.45□□□□□ -0.9
SDCBP-212ENST00000523483 HELZP42694 1942 aaKnown RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 IL1BP01584 269 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 CISD3P0C7P0 127 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 RAD51Q06609 339 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 CDH17Q12864 832 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 RFTN1Q14699 578 aaPredicted RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 SLMAPQ14BN4 828 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 TPRG1Q6ZUI0 275 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 XAB2Q9HCS7 855 aaKnown RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 BCCIPQ9P287 314 aaKnown RBP eCLIP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
SDCBP-212ENST00000523483 ANHXE9PGG2 379 aa9.44□□□□□ -0.9
SDCBP-212ENST00000523483 POC1B-GALNT4F8VUJ3 575 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms