RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PDFQ9HBH1 243 aa18.96■□□□□ 0.63
SPIDR-220ENST00000522900 CAPN11Q9UMQ6 739 aa18.96■□□□□ 0.63
SPIDR-220ENST00000522900 DOCK9Q9BZ29 2069 aa18.96■□□□□ 0.63
SPIDR-220ENST00000522900 CHD5Q8TDI0 1954 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 CABIN1Q9Y6J0 2220 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 POM121BA6NF01 834 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 YKT6O15498 198 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 PRPSAP2O60256 369 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 MAGEC1O60732 1142 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 LDOC1O95751 146 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-220ENST00000522900 ERCC2P18074 760 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 IL1R2P27930 398 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 HTR7P34969 479 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 ZBED6P86452 979 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 DNAJC3Q13217 504 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 PPP6R3Q5H9R7 873 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-220ENST00000522900 KIAA1161Q6NSJ0 714 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 CCNI2Q6ZMN8 369 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-220ENST00000522900 KDM7AQ6ZMT4 941 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 Q6ZSR6 202 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 RFX8Q6ZV50 586 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 OXR1Q8N573 874 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 CASKIN2Q8WXE0 1202 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 TRIM11Q96F44 468 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 CNDP2Q96KP4 475 aaKnown RBP18.95■□□□□ 0.62
SPIDR-220ENST00000522900 C1QTNF2Q9BXJ5 285 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 CALN1Q9BXU9 219 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 OSBPL1AQ9BXW6 950 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 THAP2Q9H0W7 228 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 CWC15Q9P013 229 aaKnown RBP18.95■□□□□ 0.62
SPIDR-220ENST00000522900 UBA2Q9UBT2 640 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-220ENST00000522900 MFHAS1Q9Y4C4 1052 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 SCINQ9Y6U3 715 aa18.95■□□□□ 0.62
SPIDR-220ENST00000522900 USP24Q9UPU5 2620 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 A0A087X0T9 212 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 ENC1O14682 589 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 DAPK3O43293 454 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 PRAMEF11O60813 436 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 IGSF6O95976 241 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 GYPCP04921 128 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 SERPING1P05155 500 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 FAM228BP0C875 321 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 MYBL1P10243 752 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 TIMP2P16035 220 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 AFMIDQ63HM1 303 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 ARHGAP36Q6ZRI8 547 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 TMPRSS7Q7RTY8 843 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 ABI3BPQ7Z7G0 1075 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 TTC7BQ86TV6 843 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 ARHGAP12Q8IWW6 846 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 TP53INP2Q8IXH6 220 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 SLC22A18ASQ8N1D0 253 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 SLC25A45Q8N413 288 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 NPWQ8N729 165 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 RAB7BQ96AH8 199 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 BTBD6Q96KE9 485 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 KLF6Q99612 283 aaPredicted RBP18.94■□□□□ 0.62
SPIDR-220ENST00000522900 MRPL47Q9HD33 250 aaKnown RBP18.94■□□□□ 0.62
SPIDR-220ENST00000522900 KLHL11Q9NVR0 708 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 UCKL1Q9NWZ5 548 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 HS3ST3A1Q9Y663 406 aa18.94■□□□□ 0.62
SPIDR-220ENST00000522900 BZW2Q9Y6E2 419 aaKnown RBP18.94■□□□□ 0.62
SPIDR-220ENST00000522900 EIF3CLB5ME19 914 aaKnown RBP18.93■□□□□ 0.62
SPIDR-220ENST00000522900 NEMP1O14524 444 aa18.93■□□□□ 0.62
SPIDR-220ENST00000522900 AREL1O15033 823 aa18.93■□□□□ 0.62
SPIDR-220ENST00000522900 TSPAN6O43657 245 aa18.93■□□□□ 0.62
SPIDR-220ENST00000522900 CAPNS1P04632 268 aa18.93■□□□□ 0.62
SPIDR-220ENST00000522900 ZNF542PQ5EBM4 170 aa18.93■□□□□ 0.62
SPIDR-220ENST00000522900 TXNRD3NBQ6F5E7 133 aa18.93■□□□□ 0.62
SPIDR-220ENST00000522900 DHRS13Q6UX07 377 aa18.93■□□□□ 0.62
SPIDR-220ENST00000522900 EIF3CQ99613 913 aaKnown RBP18.93■□□□□ 0.62
SPIDR-220ENST00000522900 LUC7L2Q9Y383 392 aaKnown RBP18.93■□□□□ 0.62
SPIDR-220ENST00000522900 FAM149AA5PLN7 773 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 ARHGAP42A6NI28 874 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 A6NNZ2 444 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 TRIM38O00635 465 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 BUB1BO60566 1050 aaPredicted RBP18.92■□□□□ 0.62
SPIDR-220ENST00000522900 MMP20O60882 483 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 PIGNO95427 931 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 PCK1P35558 622 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 RGRP47804 291 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 HCAR3P49019 387 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 CLDN6P56747 220 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 RAD51Q06609 339 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 SGCGQ13326 291 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 DPYSQ14117 519 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 NFKBIBQ15653 356 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 SMTNL2Q2TAL5 461 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 PSTKQ8IV42 348 aaKnown RBP18.92■□□□□ 0.62
SPIDR-220ENST00000522900 TSC1Q92574 1164 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 ARHGEF26Q96DR7 871 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 LENG8Q96PV6 779 aaPredicted RBP18.92■□□□□ 0.62
SPIDR-220ENST00000522900 CPEB1Q9BZB8 566 aaKnown RBP18.92■□□□□ 0.62
SPIDR-220ENST00000522900 XPO4Q9C0E2 1151 aaKnown RBP18.92■□□□□ 0.62
SPIDR-220ENST00000522900 DONSONQ9NYP3 566 aa18.92■□□□□ 0.62
SPIDR-220ENST00000522900 TMEM8BA6NDV4 472 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 TAF4O00268 1085 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 DFFAO00273 331 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 DGKAP23743 735 aa18.91■□□□□ 0.62
SPIDR-220ENST00000522900 CASP14P31944 242 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms