RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ISG20Q96AZ6 181 aaKnown RBP21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 P2RY13Q9BPV8 354 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 TRPV5Q9NQA5 729 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 SLC8A2Q9UPR5 921 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 SHROOM3Q8TF72 1996 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 KIF26AQ9ULI4 1882 aaPredicted RBP21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 VCANP13611 3396 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 SPECC1L-ADORA2AF8WAN1 911 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 ATP9BO43861 1147 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 BANF1O75531 89 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 ZNF821O75541 412 aaPredicted RBP21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 MLNP12872 115 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 PMS2P54278 862 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 SNRPD1P62314 119 aaKnown RBP21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 DNAJC21Q5F1R6 531 aaKnown RBP21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 NCEH1Q6PIU2 408 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 PCDH20Q8N6Y1 951 aaKnown RBP21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 OR6K2Q8NGY2 324 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 UCMAQ8WVF2 138 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 IFT43Q96FT9 208 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 FBRSL1Q9HCM7 1045 aaKnown RBP21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 EVLQ9UI08 416 aaPredicted RBP21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 XIRP2A4UGR9 3374 aa21.63■■□□□ 1.05
R3HCC1-208ENST00000522012 CHD5Q8TDI0 1954 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 TTC34A8MYJ7 566 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 LOC730098B7Z3J9 87 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 EIF3HO15372 352 aaKnown RBP eCLIP21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 NARSO43776 548 aaKnown RBP21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 ADRA1AP35348 466 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 MAGEA4P43358 317 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 SESN2P58004 480 aaPredicted RBP21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 FNDC3BQ53EP0 1204 aaKnown RBP21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 RALGPS1Q5JS13 557 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 ZBED8Q8IZ13 594 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 OR2AP1Q8NGE2 309 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 DNASE1L2Q92874 299 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 NSMCE3Q96MG7 304 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 TXLNGYQ9BZA5 131 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 CASS4Q9NQ75 786 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 HEBP1Q9NRV9 189 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 PIAS3Q9Y6X2 628 aa21.62■■□□□ 1.05
R3HCC1-208ENST00000522012 PRUNE2Q8WUY3 3088 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 MYOFQ9NZM1 2061 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 GSRP00390 522 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 CTHP32929 405 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 CSNK1DP48730 415 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 AP1S1P61966 158 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 TDGQ13569 410 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 FASTKD3Q14CZ7 662 aaKnown RBP21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 SLC14A2Q15849 920 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 CARD16Q5EG05 197 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 Q6ZVU0 165 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 ANKMY2Q8IV38 441 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 SLC25A41Q8N5S1 370 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 PHACTR1Q9C0D0 580 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 C8orf33Q9H7E9 229 aaPredicted RBP21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 HECAQ9UBI9 543 aaPredicted RBP21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 PCDHGC4Q9Y5F7 938 aa21.61■■□□□ 1.05
R3HCC1-208ENST00000522012 E7ESA3 106 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 ALOX15BO15296 676 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 TPH1P17752 444 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 MAGEA3P43357 314 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 MAPK8P45983 427 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 RECQLP46063 649 aaPredicted RBP21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 VASPP50552 380 aaPredicted RBP21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 PFKPQ01813 784 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 CDK18Q07002 472 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 CDH17Q12864 832 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 MYLK3Q32MK0 819 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 RANBP10Q6VN20 620 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 RALGPS2Q86X27 583 aaPredicted RBP21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 SUGP1Q8IWZ8 645 aaKnown RBP21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 FRS2Q8WU20 508 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 UBLCP1Q8WVY7 318 aaPredicted RBP21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 MYO19Q96H55 970 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 C9orf72Q96LT7 481 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 SEMA4AQ9H3S1 761 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 BRWD1Q9NSI6 2320 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 RAI2Q9Y5P3 530 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 AP3B1O00203 1094 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 MGAT1P26572 445 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 GKP32189 559 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 CHRNA4P43681 627 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 DENND2CQ68D51 928 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 TXNDC11Q6PKC3 985 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 FBXO36Q8NEA4 188 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 PYROXD1Q8WU10 500 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 FEM1CQ96JP0 617 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 CDC42EP4Q9H3Q1 356 aaKnown RBP21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 BFARQ9NZS9 450 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 CHKBQ9Y259 395 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 MAD1L1Q9Y6D9 718 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 C5orf42Q9H799 3197 aa21.6■■□□□ 1.05
R3HCC1-208ENST00000522012 COL4A3Q01955 1670 aa21.59■■□□□ 1.05
R3HCC1-208ENST00000522012 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.59■■□□□ 1.05
R3HCC1-208ENST00000522012 LOC285095A0A1B0GVY8 99 aa21.59■■□□□ 1.05
R3HCC1-208ENST00000522012 SDR42E2A6NKP2 422 aa21.59■■□□□ 1.05
R3HCC1-208ENST00000522012 ELK3P41970 407 aa21.59■■□□□ 1.05
R3HCC1-208ENST00000522012 NPY2RP49146 381 aa21.59■■□□□ 1.05
R3HCC1-208ENST00000522012 CCNHP51946 323 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms