RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 AAGABQ6PD74 315 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 DHFR2Q86XF0 187 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 CHPFQ8IZ52 775 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 TCP10LQ8TDR4 215 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 RORBQ92753 470 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 PPP1R10Q96QC0 940 aaKnown RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 COMMD8Q9NX08 183 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 TNPO3Q9Y5L0 923 aaKnown RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 ARL5CA6NH57 179 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 SCAMP3O14828 347 aaKnown RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 NUDT17P0C025 328 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 TSHRP16473 764 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 DRD4P21917 467 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 ADRA1BP35368 520 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 CHI3L1P36222 383 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 TRIM71Q2Q1W2 868 aaKnown RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 PSRC1Q6PGN9 363 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 CES3Q6UWW8 571 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 NKAPQ8N5F7 415 aaKnown RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 ZNF513Q8N8E2 541 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 MAB21L3Q8N8X9 362 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 FAM126AQ9BYI3 521 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 hCG_1818297A0A087WSY0 165 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 A0A087X1B8 175 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 ARVCFO00192 962 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 IFNA14P01570 189 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 FMO4P31512 558 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 ARHGAP1Q07960 439 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 TAB1Q15750 504 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 FAM98BQ52LJ0 330 aaKnown RBP16.33■□□□□ 0.21
USP42-207ENST00000521713 OR52K1Q8NGK4 314 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 OR8D1Q8WZ84 308 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 PHF21BQ96EK2 531 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 DCUN1D5Q9BTE7 237 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 PCYOX1Q9UHG3 505 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 AGO1Q9UL18 857 aaKnown RBP16.33■□□□□ 0.21
USP42-207ENST00000521713 TDRKHQ9Y2W6 561 aaKnown RBP16.33■□□□□ 0.21
USP42-207ENST00000521713 ADAMTSL3P82987 1691 aa16.33■□□□□ 0.21
USP42-207ENST00000521713 CBX6O95503 412 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 IL1BP01584 269 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 HTR7P34969 479 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 TTPAP49638 278 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 TOP3AQ13472 1001 aaPredicted RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 C1DQ13901 141 aaKnown RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 INSCQ1MX18 579 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 PTPN20Q4JDL3 420 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 LYPLAL1Q5VWZ2 237 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 DHRSXQ8N5I4 330 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 C2orf15Q8WU43 125 aaKnown RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 CLEC4MQ9H2X3 399 aaPredicted RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 LRRC19Q9H756 370 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 TRMT13Q9NUP7 481 aaKnown RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 CFAP97Q9P2B7 532 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 SFMBT1Q9UHJ3 866 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 ENOPH1Q9UHY7 261 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 CROTQ9UKG9 612 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 MRPL42Q9Y6G3 142 aaKnown RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 CACNA1FO60840 1977 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 FAM25AB3EWG3 89 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 FAM25CB3EWG5 89 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 FAM25GB3EWG6 89 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 E9PBE3 544 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 UBDO15205 165 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 LDLRP01130 860 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 CLCNKBP51801 687 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 DRG2P55039 364 aaKnown RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 LILRA4P59901 499 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 SAMD4BQ5PRF9 694 aaKnown RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 AFTPHQ6ULP2 937 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 KRT73Q86Y46 540 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 PRCCQ92733 491 aaPredicted RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 AHCYL2Q96HN2 611 aaKnown RBP16.33■□□□□ 0.2
USP42-207ENST00000521713 DEC1Q9P2X7 70 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 BTN3A1O00481 513 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 NFATC1O95644 943 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 BLVRAP53004 296 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 ATP6AP1LQ52LC2 224 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 SPANXN2Q5MJ10 180 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 TMEM63BQ5T3F8 832 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 ALLCQ8N6M5 410 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 MCRS1Q96EZ8 462 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 TRIM8Q9BZR9 551 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 USE1Q9NZ43 259 aa16.33■□□□□ 0.2
USP42-207ENST00000521713 A0A088AWK7 358 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 C15orf38-AP3S2A0A0A6YYH1 394 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 A0A1W2PQH9 124 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 PAGE1O75459 146 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 MFN2O95140 757 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 CST3P01034 146 aaPredicted RBP16.32■□□□□ 0.2
USP42-207ENST00000521713 IMPDH2P12268 514 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 ZNF10P21506 573 aaPredicted RBP16.32■□□□□ 0.2
USP42-207ENST00000521713 ADRA1DP25100 572 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 HTR1BP28222 390 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 TALDO1P37837 337 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 GPR1P46091 355 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 SLC1A6P48664 564 aa16.32■□□□□ 0.2
USP42-207ENST00000521713 CRY1Q16526 586 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms