RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TRAFD1O14545 582 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 ARHGAP33O14559 1287 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 BCAT2O15382 392 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 ITPKAP23677 461 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 AFF3P51826 1226 aaKnown RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 ELP6Q0PNE2 266 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PUM1Q14671 1186 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLK4-209ENST00000521621 SLC45A4Q5BKX6 768 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PRPF39Q86UA1 669 aaKnown RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 HORMAD1Q86X24 394 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PLD5Q8N7P1 536 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 MFSD2AQ8NA29 543 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 C12orf50Q8NA57 414 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 NSMCE1Q8WV22 266 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 RAPGEF5Q92565 580 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 TADA1Q96BN2 335 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 IL12RB2Q99665 862 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 CINPQ9BW66 212 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 C1QTNF2Q9BXJ5 285 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 TMEM74BQ9NUR3 256 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 DNPEPQ9ULA0 475 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 FAM170AA1A519 330 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 C16orf96A6NNT2 1141 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 HACD1B0YJ81 288 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PRAMEF26H0Y7S4 382 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 MTSS1O43312 755 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 CD48P09326 243 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 CSRP1P21291 193 aaKnown RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 NFKBIAP25963 317 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 TEAD1P28347 426 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PEX5P50542 639 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 POLR2LP62875 67 aaKnown RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 RPS21P63220 83 aaKnown RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 DAB2IPQ5VWQ8 1189 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 TMEM145Q8NBT3 493 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 ZNF830Q96NB3 372 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 ATP13A3Q9H7F0 1226 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 INVSQ9Y283 1065 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 ADGRG1Q9Y653 693 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 RCCD1A6NED2 376 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 APOL1O14791 398 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 SPINT1O43278 529 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PALMO75781 387 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 HOXC4P09017 264 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 SERPINA4P29622 427 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 KIF5AQ12840 1032 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PDK1Q15118 436 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 ZNF284Q2VY69 593 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 TFDP3Q5H9I0 405 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 SPOCD1Q6ZMY3 1216 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 PARS2Q7L3T8 475 aaKnown RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 ERMP1Q7Z2K6 904 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 LRRC8AQ8IWT6 810 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 CBARPQ8N350 705 aaPredicted RBP9.58□□□□□ -0.88
CLK4-209ENST00000521621 DCLK2Q8N568 766 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 TNKS2Q9H2K2 1166 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 SUV39H2Q9H5I1 410 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 GRPEL1Q9HAV7 217 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 TM9SF3Q9HD45 589 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 DTLQ9NZJ0 730 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 ATG2BQ96BY7 2078 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 PSMD11O00231 422 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 SPOPO43791 374 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 MFSD11O43934 449 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 CER1O95813 267 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 CTSKP43235 329 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 RXRGP48443 463 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 PRKD1Q15139 912 aaPredicted RBP9.57□□□□□ -0.88
CLK4-209ENST00000521621 ATP13A4Q4VNC1 1196 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 MARC1Q5VT66 337 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 BBS12Q6ZW61 710 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 PIP4P1Q86T03 277 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 NT5DC3Q86UY8 548 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 NLRP8Q86W28 1048 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 CCDC13Q8IYE1 715 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 PIGKQ92643 395 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 VAT1Q99536 393 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 FRMD8P1Q9BZ68 369 aaPredicted RBP9.57□□□□□ -0.88
CLK4-209ENST00000521621 TMEM9BQ9NQ34 198 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 SALL4Q9UJQ4 1053 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 TP53BP1Q12888 1972 aaPredicted RBP9.57□□□□□ -0.88
CLK4-209ENST00000521621 hCG_1818297A0A087WSY0 165 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 LNP1A1A4G5 178 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 DFFAO00273 331 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 CDX4O14627 284 aaPredicted RBP9.57□□□□□ -0.88
CLK4-209ENST00000521621 PPP1R12AO14974 1030 aaPredicted RBP9.57□□□□□ -0.88
CLK4-209ENST00000521621 FZD6O60353 706 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 ZRANB2O95218 330 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLK4-209ENST00000521621 KRT1P04264 644 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 TIMP2P16035 220 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 MMP13P45452 471 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 MMRN1Q13201 1228 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 TRIM61Q5EBN2 209 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 DPPA4Q7L190 304 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 ABI3BPQ7Z7G0 1075 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 CPNE8Q86YQ8 564 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 CELF6Q96J87 481 aaKnown RBP9.57□□□□□ -0.88
CLK4-209ENST00000521621 FEM1CQ96JP0 617 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 CALN1Q9BXU9 219 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms