RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 KRT7P08729 469 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 CD48P09326 243 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 CEACAM1P13688 526 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 CSRP1P21291 193 aaKnown RBP14.36□□□□□ -0.11
VEGFA-221ENST00000520265 NUDT1P36639 197 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 NOP2P46087 812 aaKnown RBP14.36□□□□□ -0.11
VEGFA-221ENST00000520265 HCAR3P49019 387 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 ZNF75DP51815 510 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 RPS21P63220 83 aaKnown RBP14.36□□□□□ -0.11
VEGFA-221ENST00000520265 SIM1P81133 766 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-221ENST00000520265 SGCGQ13326 291 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 SUZ12Q15022 739 aaKnown RBP14.36□□□□□ -0.11
VEGFA-221ENST00000520265 CYTH1Q15438 398 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 SPA17Q15506 151 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 CCDC157Q569K6 752 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 PTAR1Q7Z6K3 402 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-221ENST00000520265 ARHGAP12Q8IWW6 846 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 TP53INP2Q8IXH6 220 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 BBS5Q8N3I7 341 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 LZTR1Q8N653 840 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 SLC35G2Q8TBE7 412 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 FEM1CQ96JP0 617 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 ORAI3Q9BRQ5 295 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 PDFQ9HBH1 243 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 ETNK2Q9NVF9 386 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 LHX3Q9UBR4 397 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 LCMT1Q9UIC8 334 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 NENFQ9UMX5 172 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 DMTF1Q9Y222 760 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 TTLL3Q9Y4R7 772 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 FADS3Q9Y5Q0 445 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 CHD5Q8TDI0 1954 aa14.36□□□□□ -0.11
VEGFA-221ENST00000520265 TLR4O00206 839 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 LATO43561 262 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 MAGEC1O60732 1142 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 MAP3K6O95382 1288 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 WNT1P04628 370 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 ADRB1P08588 477 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 CD59P13987 128 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 HNRNPA2B1P22626 353 aaKnown RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 ABL2P42684 1182 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 CTSKP43235 329 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 CLDN2P57739 230 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 TAS2R40P59535 323 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 IL10RBQ08334 325 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 TBX2Q13207 712 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 SLC14A1Q13336 389 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 LBRQ14739 615 aaKnown RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 INAVAQ3KP66 663 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 ATP13A4Q4VNC1 1196 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 TMCO4Q5TGY1 634 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 KIAA1161Q6NSJ0 714 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 NEK5Q6P3R8 708 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 MAP7D3Q8IWC1 876 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 RHOT2Q8IXI1 618 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 PLPP6Q8IY26 295 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 TSEN2Q8NCE0 465 aaKnown RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 RHBDD1Q8TEB9 315 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 RFFLQ8WZ73 363 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 RAB7BQ96AH8 199 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 FAM131CQ96AQ9 280 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 KLHDC7BQ96G42 594 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 WRAP53Q9BUR4 548 aaKnown RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 SEPT3Q9UH03 358 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 GGT7Q9UJ14 662 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 ASCC3Q8N3C0 2202 aaKnown RBP14.35□□□□□ -0.11
VEGFA-221ENST00000520265 TMEM131Q92545 1883 aa14.35□□□□□ -0.11
VEGFA-221ENST00000520265 LRRD1A4D1F6 860 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 IGLON5A6NGN9 336 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 SPOPO43791 374 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 KRT1P04264 644 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ITGAVP06756 1048 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 THEGLP0DJG4 465 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 SERPINA4P29622 427 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 CYLC1P35663 651 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 MAGEA1P43355 309 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ARRB1P49407 418 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 SCNN1BP51168 640 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ITKQ08881 620 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ZNF284Q2VY69 593 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 GATAD2AQ86YP4 633 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 TC2NQ8N9U0 490 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 MFSD2AQ8NA29 543 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 PDCD6IPQ8WUM4 868 aaKnown RBP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ELF4Q99607 663 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ATP13A3Q9H7F0 1226 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 ZFR2Q9UPR6 939 aaKnown RBP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 HYOU1Q9Y4L1 999 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
VEGFA-221ENST00000520265 TP53BP1Q12888 1972 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-221ENST00000520265 CACNA1EQ15878 2313 aa14.33□□□□□ -0.11
VEGFA-221ENST00000520265 FLRT2O43155 660 aa14.33□□□□□ -0.12
VEGFA-221ENST00000520265 TSPAN6O43657 245 aa14.33□□□□□ -0.12
VEGFA-221ENST00000520265 MFSD11O43934 449 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms