RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 SCUBE2Q9NQ36 999 aa17.43■□□□□ 0.38
CLK4-204ENST00000520126 SAE1Q9UBE0 346 aaPredicted RBP17.43■□□□□ 0.38
CLK4-204ENST00000520126 EIF2B4Q9UI10 523 aaKnown RBP17.43■□□□□ 0.38
CLK4-204ENST00000520126 CHD5Q8TDI0 1954 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 hCG_1818297A0A087WSY0 165 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 BCLAF3A2AJT9 711 aaKnown RBP17.42■□□□□ 0.38
CLK4-204ENST00000520126 METTL12A8MUP2 240 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 ZNF487B1APH4 448 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 PPP1R12AO14974 1030 aaPredicted RBP17.42■□□□□ 0.38
CLK4-204ENST00000520126 MUSKO15146 869 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 GJB3O75712 270 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 CCNCP24863 283 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 NEK3P51956 506 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 PDK1Q15118 436 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 ZNF805Q5CZA5 627 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 LRRC73Q5JTD7 316 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 SPDYCQ5MJ68 293 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 FAM182AQ5T1J6 154 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 KIAA0895LQ68EN5 471 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 AADACL2Q6P093 401 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 PARS2Q7L3T8 475 aaKnown RBP17.42■□□□□ 0.38
CLK4-204ENST00000520126 TTC7BQ86TV6 843 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 VSIG1Q86XK7 387 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 CAMK1DQ8IU85 385 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 CCDC13Q8IYE1 715 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 C12orf50Q8NA57 414 aaPredicted RBP17.42■□□□□ 0.38
CLK4-204ENST00000520126 CADM4Q8NFZ8 388 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 PDCD6IPQ8WUM4 868 aaKnown RBP17.42■□□□□ 0.38
CLK4-204ENST00000520126 P3H4Q92791 437 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 OSBPL1AQ9BXW6 950 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 SEMA4GQ9NTN9 838 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 TMEM74BQ9NUR3 256 aa17.42■□□□□ 0.38
CLK4-204ENST00000520126 RBM22Q9NW64 420 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLK4-204ENST00000520126 ZFHX2Q9C0A1 2572 aaPredicted RBP17.41■□□□□ 0.38
CLK4-204ENST00000520126 C16orf96A6NNT2 1141 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 MIF4GDA9UHW6 222 aaKnown RBP17.41■□□□□ 0.38
CLK4-204ENST00000520126 KCNK1O00180 336 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 MATN3O15232 486 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 JCHAINP01591 159 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 PYGMP11217 842 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 CCNB1P14635 433 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 ITGB7P26010 798 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 BCL2L1Q07817 233 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 ADCY2Q08462 1091 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 SF3A2Q15428 464 aaKnown RBP17.41■□□□□ 0.38
CLK4-204ENST00000520126 AGBL4Q5VU57 503 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 BZW1Q7L1Q6 419 aaKnown RBP17.41■□□□□ 0.38
CLK4-204ENST00000520126 ZC3H18Q86VM9 953 aaKnown RBP17.41■□□□□ 0.38
CLK4-204ENST00000520126 SYT12Q8IV01 421 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 ZCCHC9Q8N567 271 aaKnown RBP17.41■□□□□ 0.38
CLK4-204ENST00000520126 ALG3Q92685 438 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 KLK6Q92876 244 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 BIRC7Q96CA5 298 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 LRIG1Q96JA1 1093 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 CEP41Q9BYV8 373 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 OSBPL8Q9BZF1 889 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 SUV39H2Q9H5I1 410 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 ATP13A3Q9H7F0 1226 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 PCDHGA5Q9Y5G8 931 aa17.41■□□□□ 0.38
CLK4-204ENST00000520126 PATE3B3GLJ2 98 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 SLC7A4O43246 635 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 PLRG1O43660 514 aaKnown RBP17.4■□□□□ 0.38
CLK4-204ENST00000520126 RNGTTO60942 597 aaKnown RBP17.4■□□□□ 0.38
CLK4-204ENST00000520126 PEX11BO96011 259 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 ADRB3P13945 408 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 GNSP15586 552 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 PECAM1P16284 738 aaPredicted RBP17.4■□□□□ 0.38
CLK4-204ENST00000520126 TGM2P21980 687 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 SERPINA4P29622 427 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 PEX5P50542 639 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 COPS2P61201 443 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 GRM3Q14832 879 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 AASDHQ4L235 1098 aaPredicted RBP17.4■□□□□ 0.38
CLK4-204ENST00000520126 TRIM61Q5EBN2 209 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 PIP5KL1Q5T9C9 394 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 TCEAL6Q6IPX3 200 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 PGBD5Q8N414 524 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 TCEAL3Q969E4 200 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 HDAC11Q96DB2 347 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 PSKH2Q96QS6 385 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 HDAC8Q9BY41 377 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 KCNF1Q9H3M0 494 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 PARD6AQ9NPB6 346 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 VPS45Q9NRW7 570 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 HAUS2Q9NVX0 235 aa17.4■□□□□ 0.38
CLK4-204ENST00000520126 TRMT1Q9NXH9 659 aaKnown RBP17.4■□□□□ 0.38
CLK4-204ENST00000520126 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.4■□□□□ 0.38
CLK4-204ENST00000520126 SHROOM3Q8TF72 1996 aa17.39■□□□□ 0.38
CLK4-204ENST00000520126 NUMA1Q14980 2115 aa17.39■□□□□ 0.37
CLK4-204ENST00000520126 H7C0C1 242 aa17.39■□□□□ 0.37
CLK4-204ENST00000520126 KHNYNO15037 678 aaKnown RBP17.39■□□□□ 0.37
CLK4-204ENST00000520126 HSPA9P38646 679 aaKnown RBP17.39■□□□□ 0.37
CLK4-204ENST00000520126 ATP5OP48047 213 aa17.39■□□□□ 0.37
CLK4-204ENST00000520126 NR2C2P49116 596 aa17.39■□□□□ 0.37
CLK4-204ENST00000520126 PPP2CBP62714 309 aa17.39■□□□□ 0.37
CLK4-204ENST00000520126 PPP2CAP67775 309 aa17.39■□□□□ 0.37
CLK4-204ENST00000520126 NSUN2Q08J23 767 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLK4-204ENST00000520126 HNRNPDQ14103 355 aaKnown RBP17.39■□□□□ 0.37
CLK4-204ENST00000520126 PPP2R5EQ16537 467 aa17.39■□□□□ 0.37
CLK4-204ENST00000520126 PRPF39Q86UA1 669 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms