RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 LBRQ14739 615 aaKnown RBP11.68□□□□□ -0.54
SPIDR-212ENST00000519661 SLC14A2Q15849 920 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 ARSIQ5FYB1 569 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 DCAF12L1Q5VU92 463 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 TIGD7Q6NT04 549 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-212ENST00000519661 NCEH1Q6PIU2 408 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 BRAT1Q6PJG6 821 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 NT5DC3Q86UY8 548 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 IQCHQ86VS3 1027 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 RCOR2Q8IZ40 523 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 ATPAF2Q8N5M1 289 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 SPC24Q8NBT2 197 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 TMEM145Q8NBT3 493 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 TSEN2Q8NCE0 465 aaKnown RBP11.68□□□□□ -0.54
SPIDR-212ENST00000519661 NETO1Q8TDF5 533 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 TM6SF2Q9BZW4 377 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 TSGA10Q9BZW7 698 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 SP110Q9HB58 689 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 GPR27Q9NS67 375 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 SLC6A14Q9UN76 642 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPIDR-212ENST00000519661 FADS3Q9Y5Q0 445 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 NUP205Q92621 2012 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 THADAQ6YHU6 1953 aa11.68□□□□□ -0.54
SPIDR-212ENST00000519661 hCG_1818297A0A087WSY0 165 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 GOLGA6L3A6NEY3 463 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 C16orf96A6NNT2 1141 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 KPNA3O00505 521 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-212ENST00000519661 TSPAN6O43657 245 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 PALMO75781 387 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 ZRANB2O95218 330 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPIDR-212ENST00000519661 ZNF883P0CG24 379 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 GNSP15586 552 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 TGM2P21980 687 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 NOP2P46087 812 aaKnown RBP11.67□□□□□ -0.54
SPIDR-212ENST00000519661 RGRP47804 291 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 AFF3P51826 1226 aaKnown RBP11.67□□□□□ -0.54
SPIDR-212ENST00000519661 TFDP2Q14188 446 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 TFDP3Q5H9I0 405 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 ATXN7L2Q5T6C5 722 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-212ENST00000519661 KIAA1161Q6NSJ0 714 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 MFSD7Q6UXD7 560 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 GDPD4Q6W3E5 623 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 SPOCD1Q6ZMY3 1216 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 BBS12Q6ZW61 710 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 PARS2Q7L3T8 475 aaKnown RBP11.67□□□□□ -0.54
SPIDR-212ENST00000519661 DAAM2Q86T65 1068 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 SYCE1Q8N0S2 351 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 FAM174AQ8TBP5 190 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 KIAA1524Q8TCG1 905 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 KRT35Q92764 455 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 TADA1Q96BN2 335 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 RBM41Q96IZ5 413 aaKnown RBP11.67□□□□□ -0.54
SPIDR-212ENST00000519661 NUDCD1Q96RS6 583 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 IL12RB2Q99665 862 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 C1QTNF2Q9BXJ5 285 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 GOLPH3Q9H4A6 298 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 EBF2Q9HAK2 575 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 PPIL1Q9Y3C6 166 aa11.67□□□□□ -0.54
SPIDR-212ENST00000519661 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 A0A1W2PR77 199 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 DFFAO00273 331 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 CDX4O14627 284 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 APOL1O14791 398 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 SLC30A4O14863 429 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 KHNYNO15037 678 aaKnown RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 VILLO15195 856 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 BCAT2O15382 392 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 FZD6O60353 706 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 KRT1P04264 644 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 SSR1P43307 286 aaKnown RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 MARCKSL1P49006 195 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 NUMBP49757 651 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 PDK1Q15118 436 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 PRKD1Q15139 912 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 ZNF284Q2VY69 593 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 MARC1Q5VT66 337 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 NAPEPLDQ6IQ20 393 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 DBX2Q6ZNG2 339 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 BZW1Q7L1Q6 419 aaKnown RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 SRLQ86TD4 932 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 HORMAD1Q86X24 394 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 CACUL1Q86Y37 369 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 RAVER1Q8IY67 606 aaKnown RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 CBARPQ8N350 705 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 PGBD5Q8N414 524 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 OR14C36Q8NHC7 312 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 GRIN3AQ8TCU5 1115 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 PIGKQ92643 395 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 ALG3Q92685 438 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 NSMCE3Q96MG7 304 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 LENG8Q96PV6 779 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-212ENST00000519661 DESI2Q9BSY9 194 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 TM9SF3Q9HD45 589 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 DNAAF2Q9NVR5 837 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms