RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 ZNF718Q3SXZ3 478 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 LRRC24Q50LG9 513 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 CCDC158Q5M9N0 1113 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 MAEAQ7L5Y9 396 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 SESTD1Q86VW0 696 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 CHPFQ8IZ52 775 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 SPSB4Q96A44 273 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 MSI2Q96DH6 328 aaKnown RBP3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 KAZALD1Q96I82 304 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 ZBTB45Q96K62 511 aaPredicted RBP3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 LRGUKQ96M69 825 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 PPP1R9BQ96SB3 815 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 CDCA3Q99618 268 aaPredicted RBP3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 KATNAL1Q9BW62 490 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 B3GNT5Q9BYG0 378 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 PUS3Q9BZE2 481 aaKnown RBP3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 C22orf23Q9BZE7 217 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 FTOQ9C0B1 505 aaKnown RBP eCLIP3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 CDH19Q9H159 772 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 ALDH8A1Q9H2A2 487 aaPredicted RBP3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 VCPKMTQ9H867 229 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 GPR108Q9NPR9 543 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 TRIM36Q9NQ86 728 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 RAI14Q9P0K7 980 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 ADD3Q9UEY8 706 aaKnown RBP3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 PAXBP1Q9Y5B6 917 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 ZNF236Q9UL36 1845 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 OTOFQ9HC10 1997 aa3.16□□□□□ -1.9
ATP6V1C1-204ENST00000518959 A0A1B0GUV1 79 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 LOC102723971A0A1B0GUV8 181 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MBD3L4A6NDZ8 208 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MBD3L3A6NE82 208 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 LOC730098B7Z3J9 87 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 PYCARD-AS1I3L0S3 204 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 AGPSO00116 658 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CCP110O43303 1012 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SNAI1O95863 264 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 IQCF3P0C7M6 154 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 UBTFL1P0CB47 393 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MYBP10242 640 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 HOXB8P17481 243 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RPS6KB1P23443 525 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SLC7A1P30825 629 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MCM5P33992 734 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TROAPQ12815 778 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 COASYQ13057 564 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 NOL8Q76FK4 1167 aaKnown RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ATG9AQ7Z3C6 839 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TLK2Q86UE8 772 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CCDC146Q8IYE0 955 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TSPYL6Q8N831 410 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ANKRD44Q8N8A2 993 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 PRSS33Q8NF86 280 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RSPH1Q8WYR4 309 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 APBB2Q92870 758 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SUCLG2Q96I99 432 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 NECTIN4Q96NY8 510 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RTP3Q9BQQ7 232 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MTG1Q9BT17 334 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 PHF7Q9BWX1 381 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 THSD1Q9NS62 852 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ATP8A2Q9NTI2 1148 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CPNE7Q9UBL6 633 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 STK39Q9UEW8 545 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CD207Q9UJ71 328 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 AGO2Q9UKV8 859 aaKnown RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZHX1Q9UKY1 873 aaPredicted RBP3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SCN5AQ14524 2016 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CHD7Q9P2D1 2997 aa3.15□□□□□ -1.91
ATP6V1C1-204ENST00000518959 LINC01553A4QN01 128 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CAPN8A6NHC0 703 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 H7C4K7 107 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MBTPS2O43462 519 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RRP9O43818 475 aaKnown RBP3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 PLA2G6O60733 806 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ATG13O75143 517 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RASAL1O95294 804 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CXCL10P02778 98 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 PDGFRBP09619 1106 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 HGFP14210 728 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 IL9P15248 144 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 IBSPP21815 317 aaPredicted RBP3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 KLRC1P26715 233 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 PTDSS1P48651 473 aaKnown RBP3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 NT5C2P49902 561 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CCL23P55773 120 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SUMO3P55854 103 aaPredicted RBP3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 WDR5P61964 334 aaKnown RBP3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ICA1Q05084 483 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 UBE3AQ05086 875 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 DMWDQ09019 674 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SHBQ15464 509 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 DUSP28Q4G0W2 176 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CACHD1Q5VU97 1274 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ANO1Q5XXA6 986 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 APOA5Q6Q788 366 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CXCL17Q6UXB2 119 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ARMCX2Q7L311 632 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 G2E3Q7L622 706 aa3.14□□□□□ -1.91
ATP6V1C1-204ENST00000518959 KIAA0319LQ8IZA0 1049 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms