RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 CCDC74AQ96AQ1 378 aa11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 TBATAQ96M53 351 aa11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 SEMA3CQ99985 751 aa11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 CEP44Q9C0F1 390 aa11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 ZDHHC6Q9H6R6 413 aa11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 UBE2TQ9NPD8 197 aaPredicted RBP11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 PCDHGA4Q9Y5G9 962 aa11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 USP9XQ93008 2570 aaPredicted RBP11.54□□□□□ -0.56
CTNNA1-205ENST00000517904 SPTAN1Q13813 2472 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 PSMA7O14818 248 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 AFPP02771 609 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 RPLP0P05388 317 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 LIPCP11150 499 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 ITIH1P19827 911 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 OR1E1P30953 314 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 NOS2P35228 1153 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 CYP4F2P78329 520 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 CCL7P80098 99 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 PTK2BQ14289 1009 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 TCEA2Q15560 299 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 TBR1Q16650 682 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 LRRC73Q5JTD7 316 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 ISM2Q6H9L7 571 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 RETSATQ6NUM9 610 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 ESRP1Q6NXG1 681 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 TTI2Q6NXR4 508 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 C11orf57Q6ZUT1 292 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 NYAP1Q6ZVC0 841 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 SLC26A9Q7LBE3 791 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 VASH2Q86V25 355 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 VPS36Q86VN1 386 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 ZSCAN30Q86W11 494 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 TRIM59Q8IWR1 403 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 SDR16C5Q8N3Y7 309 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 ARL10Q8N8L6 244 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 C1orf131Q8NDD1 294 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 PCDH19Q8TAB3 1148 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 HTR3CQ8WXA8 447 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 GFM1Q96RP9 751 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 NPY6RQ99463 290 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 SPON2Q9BUD6 331 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 SLC13A1Q9BZW2 595 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 TM6SF2Q9BZW4 377 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 WDCPQ9H6R7 721 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 GDPD2Q9HCC8 539 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 ATP13A1Q9HD20 1204 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 MBNL1Q9NR56 388 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 SIRPGQ9P1W8 387 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 HECAQ9UBI9 543 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 GULP1Q9UBP9 304 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 PISDQ9UG56 409 aa11.53□□□□□ -0.56
CTNNA1-205ENST00000517904 LRP4O75096 1905 aa11.52□□□□□ -0.56
CTNNA1-205ENST00000517904 PRAMEF33A0A0G2JMD5 474 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 ILVBLA1L0T0 632 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 AGRPO00253 132 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 NEMP1O14524 444 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 AREL1O15033 823 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 NVLO15381 856 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 PRAMEF10O60809 474 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 CCKBRP32239 447 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 EIF4A3P38919 411 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 INHBCP55103 352 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 SLC6A3Q01959 620 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 APBA1Q02410 837 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 TLE1Q04724 770 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 CLCA4Q14CN2 919 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 PTPN20Q4JDL3 420 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 BRMS1LQ5PSV4 323 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 FAXCQ5TGI0 409 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 MACC1Q6ZN28 852 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 SMARCE1Q969G3 411 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 NT5C3BQ969T7 300 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 RAB7BQ96AH8 199 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 CCDC34Q96HJ3 373 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 DHTKD1Q96HY7 919 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 C1orf74Q96LT6 269 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 SRRTQ9BXP5 876 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 CPEB1Q9BZB8 566 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 STRADBQ9C0K7 418 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 SCAND2PQ9GZW5 306 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 FOXJ2Q9P0K8 574 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 ANKMY1Q9P2S6 941 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 CHD5Q8TDI0 1954 aa11.52□□□□□ -0.57
CTNNA1-205ENST00000517904 NOTCH2Q04721 2471 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 MMP20O60882 483 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 SRGAP2O75044 1071 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 UGT2B4P06133 528 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 JMJD7P0C870 316 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 USP8P40818 1118 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 ETV5P41161 510 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 SULT1E1P49888 294 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 YPEL5P62699 121 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 GNA12Q03113 381 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 PPARDQ03181 441 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 SLC20A2Q08357 652 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 ZNF805Q5CZA5 627 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 MANEAQ5SRI9 462 aa11.51□□□□□ -0.57
CTNNA1-205ENST00000517904 KLHL10Q6JEL2 608 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms