RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TRUB2O95900 331 aaKnown RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 EFEMP2O95967 443 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 KLKB1P03952 638 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CHRM4P08173 479 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SRPRAP08240 638 aaKnown RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CYP3A4P08684 503 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM58BPP0C7Q3 252 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM90A13PP0C7W8 464 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM90A24PP0C7X0 464 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CTAGE8P0CG41 777 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 KRT5P13647 590 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CTPS1P17812 591 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 ACHEP22303 614 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC6A2P23975 617 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 PON1P27169 355 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 DHPSP49366 369 aaPredicted RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 IRAK1P51617 712 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SUOXP51687 545 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 GBX2P52951 348 aaPredicted RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 F2RL1P55085 397 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 LOXL3P58215 753 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 ST8SIA6P61647 398 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CYP4A11Q02928 519 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 TAP1Q03518 808 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 RUNX1T1Q06455 604 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC18A3Q16572 532 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SGCBQ16585 318 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 HS1BP3Q53T59 392 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 KCNT1Q5JUK3 1230 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 ATG9BQ674R7 924 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 DPY19L2P1Q6NXN4 242 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMEM108Q6UXF1 575 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 TOM1L2Q6ZVM7 507 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 ARMCX2Q7L311 632 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 TADA2BQ86TJ2 420 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CTAGE6Q86UF2 777 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CTAGE4Q8IX94 777 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CLYBLQ8N0X4 340 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 METTL25Q8N6Q8 603 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 C11orf65Q8NCR3 313 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 OR56B2PQ8NGI1 322 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 GRAPLQ8TC17 118 aaPredicted RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC5A11Q8WWX8 675 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 OVCA2Q8WZ82 227 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 THRSPQ92748 146 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CASP10Q92851 521 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 HES6Q96HZ4 224 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZNF830Q96NB3 372 aaPredicted RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 OR2A14Q96R47 310 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 TRIB1Q96RU8 372 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 KCNK16Q96T55 309 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 PTDSS2Q9BVG9 487 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CARD11Q9BXL7 1154 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 MTMR12Q9C0I1 747 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 COQ10BQ9H8M1 238 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 KIF9Q9HAQ2 790 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 GCM1Q9NP62 436 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 NMRK1Q9NWW6 199 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 ETAA1Q9NY74 926 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 GMPR2Q9P2T1 348 aaKnown RBP4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 CLIP2Q9UDT6 1046 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 GMEB2Q9UKD1 530 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 FBXW2Q9UKT8 454 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SORCS3Q9UPU3 1222 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 SSX2IPQ9Y2D8 614 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 VWA7Q9Y334 891 aa4.05□□□□□ -1.76
RNU4-60P-201ENST00000517239 A0A1W2PRG0 241 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 EME2A4GXA9 379 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 NPIPB13A6NJU9 1138 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 NPIPB5A8MRT5 1133 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 NPIPB4C9JG80 1138 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM86B1E9PN63 330 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 O00370 1275 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CLIC2O15247 247 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 SRGAP3O43295 1099 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 PSPNO60542 156 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TRIM13O60858 407 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZC3H11AO75152 810 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 NDUFS3O75489 264 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 PRDM1O75626 825 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 KAT7O95251 611 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CELF2O95319 508 aaKnown RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 MT-ATP6P00846 226 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TGFAP01135 160 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMEM225BP0DP42 221 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CYP4B1P13584 511 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 IL7RP16871 459 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 HOXB4P17483 251 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 EPORP19235 508 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 ADORA2AP29274 412 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 EPHA3P29320 983 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 HOXA13P31271 388 aaPredicted RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CHRNA3P32297 505 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CXCR5P32302 372 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 FASLGP48023 281 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 MTNR1AP48039 350 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 CLK3P49761 638 aaKnown RBP4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 GZMKP49863 264 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 DIO1P49895 249 aa4.04□□□□□ -1.76
RNU4-60P-201ENST00000517239 RPS6KA3P51812 740 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms