RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 S100GP29377 79 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 SRP54P61011 504 aaKnown RBP11.11□□□□□ -0.63
TRIM41-209ENST00000515834 AFTPHQ6ULP2 937 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 FAM98AQ8NCA5 519 aaKnown RBP11.11□□□□□ -0.63
TRIM41-209ENST00000515834 TBCBQ99426 244 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 GLUD2P49448 558 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 PRSS58Q8IYP2 241 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 C18orf25Q96B23 403 aaPredicted RBP11.11□□□□□ -0.63
TRIM41-209ENST00000515834 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
TRIM41-209ENST00000515834 TTPALQ9BTX7 342 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 KIAA1522Q9P206 1035 aaPredicted RBP11.11□□□□□ -0.63
TRIM41-209ENST00000515834 DEC1Q9P2X7 70 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 ZMYM2Q9UBW7 1377 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 SATB2Q9UPW6 733 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 SLC28A2O43868 658 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 FGFR3P22607 806 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 NEDD8Q15843 81 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 KIAA0408Q6ZU52 694 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 SEMA6AQ9H2E6 1030 aa11.11□□□□□ -0.63
TRIM41-209ENST00000515834 MRPS7Q9Y2R9 242 aaKnown RBP11.11□□□□□ -0.63
TRIM41-209ENST00000515834 TNPO3Q9Y5L0 923 aaKnown RBP11.11□□□□□ -0.63
TRIM41-209ENST00000515834 SEPT4O43236 478 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 RCVRNP35243 200 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 PSEN1P49768 467 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 UAP1L1Q3KQV9 507 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ARSJQ5FYB0 599 aaPredicted RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 NARS2Q96I59 477 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 COQ7Q99807 217 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 TNKS2Q9H2K2 1166 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 TPP1O14773 563 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 PRODHO43272 600 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CALB2P22676 271 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 MAT2AP31153 395 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■■□□ 16.7
TRIM41-209ENST00000515834 TAF5Q15542 800 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 MAPK11Q15759 364 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 MCCC2Q9HCC0 563 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 DNPEPQ9ULA0 475 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CAPN6Q9Y6Q1 641 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 EML1O00423 815 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 BIRC5O15392 142 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 LDLRP01130 860 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 SERPINE1P05121 402 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ANXA6P08133 673 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ZNF37AP17032 561 aaPredicted RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CRYBB1P53674 252 aaPredicted RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 LYPLAL1Q5VWZ2 237 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 NEPROQ6NW34 567 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 PSTKQ8IV42 348 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 TCF25Q9BQ70 676 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 WRAP53Q9BUR4 548 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 PORCNQ9H237 461 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CIDEBQ9UHD4 219 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ENOPH1Q9UHY7 261 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 AGO1Q9UL18 857 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 MYO3AQ8NEV4 1616 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 GRM6O15303 877 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ASGR1P07306 291 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 LAG3P18627 525 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 MAPK8P45983 427 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 IDH2P48735 452 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 SAPCD2Q86UD0 394 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 HDDC3Q8N4P3 179 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 POU5F2Q8N7G0 328 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 NETO2Q8NC67 525 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 KAT5Q92993 513 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 DTNBP1Q96EV8 351 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CLCC1Q96S66 551 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 HECAQ9UBI9 543 aaPredicted RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 BTRCQ9Y297 605 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 PEX11AO75192 247 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ITGA3P26006 1051 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 KRR1Q13601 381 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ZCWPW2Q504Y3 356 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 BHLHB9Q6PI77 547 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CHST9Q7L1S5 443 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 OR10H5Q8NGA6 315 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CAPNS2Q96L46 248 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 TEKT5Q96M29 485 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 MCMBPQ9BTE3 642 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 GTPBP2Q9BX10 602 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 DUS2Q9NX74 493 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 GMEB2Q9UKD1 530 aa11.1□□□□□ -0.63
TRIM41-209ENST00000515834 ZNF214Q9UL59 606 aaPredicted RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 MRPS33Q9Y291 106 aaKnown RBP11.1□□□□□ -0.63
TRIM41-209ENST00000515834 CCNDBP1O95273 360 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ACRP10323 421 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 TTPAP49638 278 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PDX1P52945 283 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 DAW1Q8N136 415 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SVOPQ8N4V2 548 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 OR4A15Q8NGL6 344 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 STAG3L4Q8TBR4 150 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SMPDL3BQ92485 455 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ABI3Q9P2A4 366 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms