RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 STK40Q8N2I9 435 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 MMGT1Q8N4V1 131 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 CHST14Q8NCH0 376 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 OR2T3Q8NH03 318 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 CCHCR1Q8TD31 782 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 VOPP1Q96AW1 172 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 TADA1Q96BN2 335 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 FAM129BQ96TA1 746 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 OSBPL1AQ9BXW6 950 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 RSPH9Q9H1X1 276 aaPredicted RBP21.24■□□□□ 0.99
LSM6-207ENST00000515311 ATP13A3Q9H7F0 1226 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 IL36AQ9UHA7 158 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 WASF2Q9Y6W5 498 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 GJB3O75712 270 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 ANXA9O76027 345 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 PRNPP04156 253 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 MMP2P08253 660 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 SERPINF2P08697 491 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 ZSCAN5DPP0CG00 497 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 ETS1P14921 441 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 COL9A1P20849 921 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 PSMB4P28070 264 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 PRPSAP1Q14558 356 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 FAM182AQ5T1J6 154 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 TMEM92Q6UXU6 159 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 PRPF39Q86UA1 669 aaKnown RBP21.23■□□□□ 0.99
LSM6-207ENST00000515311 JAMLQ86YT9 394 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 KLHDC8BQ8IXV7 354 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 TMIEQ8NEW7 156 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 OR6K2Q8NGY2 324 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 ZDHHC6Q9H6R6 413 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 VPS45Q9NRW7 570 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 PPM1HQ9ULR3 514 aa21.23■□□□□ 0.99
LSM6-207ENST00000515311 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.22■□□□□ 0.99
LSM6-207ENST00000515311 FAM187AA6NFU0 413 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 TTI1O43156 1089 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 RNASEH1O60930 286 aaKnown RBP21.22■□□□□ 0.99
LSM6-207ENST00000515311 SOCS5O75159 536 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 METTL18O95568 372 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 SERPINA4P29622 427 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 FDFT1P37268 417 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 CD86P42081 329 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 COPAP53621 1224 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 SKOR1P84550 965 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 MTAPQ13126 283 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 PRUNE1Q86TP1 453 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 GRIN3AQ8TCU5 1115 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 PBXIP1Q96AQ6 731 aa21.22■□□□□ 0.99
LSM6-207ENST00000515311 ZNF641Q96N77 438 aaPredicted RBP21.22■□□□□ 0.99
LSM6-207ENST00000515311 POLMQ9NP87 494 aaPredicted RBP21.22■□□□□ 0.99
LSM6-207ENST00000515311 AAR2Q9Y312 384 aaKnown RBP21.22■□□□□ 0.99
LSM6-207ENST00000515311 TTC24A2A3L6 582 aaPredicted RBP21.21■□□□□ 0.99
LSM6-207ENST00000515311 GOLGA6CA6NDK9 693 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 GOLGA6BA6NDN3 693 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 PI15O43692 258 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 LEFTY1O75610 366 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 CTSLP07711 333 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 GOLGA6DP0CG33 693 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 CA4P22748 312 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 BCL2L1Q07817 233 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 MPP3Q13368 585 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 SEMA5AQ13591 1074 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 IHHQ14623 411 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 TRIP13Q15645 432 aaPredicted RBP21.21■□□□□ 0.99
LSM6-207ENST00000515311 ARSIQ5FYB1 569 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 ZNF776Q68DI1 518 aaPredicted RBP21.21■□□□□ 0.99
LSM6-207ENST00000515311 C8orf74Q6P047 294 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.21■□□□□ 0.99
LSM6-207ENST00000515311 NOA1Q8NC60 698 aaKnown RBP21.21■□□□□ 0.99
LSM6-207ENST00000515311 SPATA22Q8NHS9 363 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 OXNAD1Q96HP4 312 aaPredicted RBP21.21■□□□□ 0.99
LSM6-207ENST00000515311 NSMCE3Q96MG7 304 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 RBM15Q96T37 977 aaKnown RBP eCLIP21.21■□□□□ 0.99
LSM6-207ENST00000515311 GORASP1Q9BQQ3 440 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 COL25A1Q9BXS0 654 aaPredicted RBP21.21■□□□□ 0.99
LSM6-207ENST00000515311 RAB6BQ9NRW1 208 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 GOLGA6AQ9NYA3 693 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 FAM153AQ9UHL3 310 aa21.21■□□□□ 0.99
LSM6-207ENST00000515311 ERI2A8K979 691 aaKnown RBP21.2■□□□□ 0.98
LSM6-207ENST00000515311 C1QTNF3-AMACRE9PGA6 284 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 RAD51CO43502 376 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 PAPSS2O95340 614 aaPredicted RBP21.2■□□□□ 0.98
LSM6-207ENST00000515311 ADH1BP00325 375 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 GKP32189 559 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 GEMP55040 296 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 SATB1Q01826 763 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 ZBTB16Q05516 673 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 GPS1Q13098 491 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 FAM46CQ5VWP2 391 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 GDPD4Q6W3E5 623 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 FBXL6Q8N531 539 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 PIP4K2CQ8TBX8 421 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 HCAR2Q8TDS4 363 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 SPOCK2Q92563 424 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 MKRN2Q9H000 416 aaKnown RBP21.2■□□□□ 0.98
LSM6-207ENST00000515311 EPHX3Q9H6B9 360 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 ASIC3Q9UHC3 531 aa21.2■□□□□ 0.98
LSM6-207ENST00000515311 A0A1W2PQ67 120 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 TCRBV21S2A2A0A5A6 115 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 PSMD3O43242 534 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms