RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 DUSP6Q16828 381 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 CCDC30Q5VVM6 783 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 HEPHL1Q6MZM0 1159 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 SLC16A12Q6ZSM3 486 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 ANKRD52Q8NB46 1076 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 MCPH1Q8NEM0 835 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 ZMIZ2Q8NF64 920 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 PERPQ96FX8 193 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 YME1L1Q96TA2 773 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 PIP5K1AQ99755 562 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 TMEM79Q9BSE2 394 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 NUF2Q9BZD4 464 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 FOXP1Q9H334 677 aaPredicted RBP5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 TASP1Q9H6P5 420 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 BRF2Q9HAW0 419 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 HSPB2A8KAH6 182 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 KIF1CO43896 1103 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 USO1O60763 962 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 MOSPD3O75425 235 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 SEC31AO94979 1220 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 KLKB1P03952 638 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 CLEC3BP05452 202 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 MYZAPP0CAP1 466 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 SRD5A1P18405 259 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 POU1F1P28069 291 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 GPR12P47775 334 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 CLCN5P51795 746 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 LMOD3Q0VAK6 560 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 NEXNQ0ZGT2 675 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 DCTN2Q13561 401 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 HSPB2Q16082 182 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 Q5PR19 223 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 MANEAQ5SRI9 462 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 ATG9BQ674R7 924 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 HAUS3Q68CZ6 603 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 TXNDC8Q6A555 127 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 LRRC8EQ6NSJ5 796 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 TMTC3Q6ZXV5 915 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 C1QL2Q7Z5L3 287 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 LURAP1LQ8IV03 231 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 DHX40Q8IX18 779 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 KIAA2013Q8IYS2 634 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 CADM4Q8NFZ8 388 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 ADAMTS15Q8TE58 950 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 NOC3LQ8WTT2 800 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 SLC25A28Q96A46 364 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 ZNF333Q96JL9 665 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 C1QTNF7Q9BXJ2 289 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 FZD3Q9NPG1 666 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 SIRT3Q9NTG7 399 aaPredicted RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 SPATS2LQ9NUQ6 558 aaKnown RBP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 RAI2Q9Y5P3 530 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 CAPN7Q9Y6W3 813 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 PIAS3Q9Y6X2 628 aa5.4□□□□□ -1.54
HMGCS1-207ENST00000514610 SETD1BQ9UPS6 1966 aaKnown RBP5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 IGLV5-39A0A0G2JS06 123 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 GAGE12JA6NER3 117 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 PGPEP1LA6NFU8 196 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 I6L893 689 aaPredicted RBP5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 SNAP23O00161 211 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 ZC3H11AO75152 810 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 PTPN2P17706 415 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 CTCFP49711 727 aaPredicted RBP5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 ZNF81P51508 661 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 CDH12P55289 794 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 CAPSQ13938 189 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 PTGR1Q14914 329 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 RNPS1Q15287 305 aaKnown RBP5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 WASHC2DQ5SRD0 308 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 ZNF425Q6IV72 752 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 PARM1Q6UWI2 310 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 SLC46A3Q7Z3Q1 461 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 CTU1Q7Z7A3 348 aaKnown RBP5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 TBC1D26Q86UD7 250 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 CAMK1DQ8IU85 385 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 TMEM199Q8N511 208 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 BICD2Q8TD16 824 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 GPT2Q8TD30 523 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 TMEM18Q96B42 140 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 RNF183Q96D59 192 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 SAAL1Q96ER3 474 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 MSTO1Q9BUK6 570 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 SLC29A3Q9BZD2 475 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 NPFFR1Q9GZQ6 430 aa5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 RANBP17Q9H2T7 1088 aaKnown RBP5.39□□□□□ -1.55
HMGCS1-207ENST00000514610 A0A0U1RQF3 1178 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 KLRF2D3W0D1 207 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 NPIPB11E5RHQ5 1161 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 F5H0A9 414 aaPredicted RBP5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 H0YGN5 161 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 TAF4O00268 1085 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 SOCS2O14508 198 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 MMP3P08254 477 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 ENO3P13929 434 aaPredicted RBP5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 PTGER1P34995 402 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 CPOXP36551 454 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 ARL1P40616 181 aaPredicted RBP5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 RFX5P48382 616 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms