RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 C1QTNF2Q9BXJ5 285 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 OSBPL1AQ9BXW6 950 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 MIR1-1HGQ9H1L0 117 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 DEF6Q9H4E7 631 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 GPR27Q9NS67 375 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 UBA2Q9UBT2 640 aaPredicted RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 IPO11Q9UI26 975 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 ANKRD6Q9Y2G4 727 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 REXO2Q9Y3B8 237 aaKnown RBP9.85□□□□□ -0.83
RNF4-221ENST00000513643 PCDHGB2Q9Y5G2 931 aa9.85□□□□□ -0.83
RNF4-221ENST00000513643 A0A0A6YYK5 440 aaPredicted RBP9.84□□□□□ -0.83
RNF4-221ENST00000513643 FAM47DPA6NHR8 397 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 TRAFD1O14545 582 aaPredicted RBP9.84□□□□□ -0.83
RNF4-221ENST00000513643 INSIG1O15503 277 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 DAPK3O43293 454 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 BNIP3LO60238 219 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 CBFA2T3O75081 653 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 KCNK5O95279 499 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 KRT7P08729 469 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 TIMP2P16035 220 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 CDC25BP30305 580 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 ARL4AP40617 200 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 ABL2P42684 1182 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 SLC1A1P43005 524 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 DNA2P51530 1060 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 CDH6P55285 790 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 SLC10A7Q0GE19 358 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 GALNT2Q10471 571 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 SHBQ15464 509 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 HLA-BQ31612 363 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 ANKRD20A8PQ5CZ79 823 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 NCBP2-AS2Q69YL0 99 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 NAPEPLDQ6IQ20 393 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 IL27RAQ6UWB1 636 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 TMCO3Q6UWJ1 677 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 GDPD4Q6W3E5 623 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 ZSCAN30Q86W11 494 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 TMTC1Q8IUR5 882 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 MFSD2AQ8NA29 543 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 OR6K2Q8NGY2 324 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 GRIN3AQ8TCU5 1115 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 RAPGEF5Q92565 580 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 PPP1R16AQ96I34 528 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 ZNF641Q96N77 438 aaPredicted RBP9.84□□□□□ -0.83
RNF4-221ENST00000513643 SLC6A18Q96N87 628 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 TSGA13Q96PP4 275 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 LENG8Q96PV6 779 aaPredicted RBP9.84□□□□□ -0.83
RNF4-221ENST00000513643 TUBGCP5Q96RT8 1024 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 KLF6Q99612 283 aaPredicted RBP9.84□□□□□ -0.83
RNF4-221ENST00000513643 ERVMER34-1Q9H9K5 563 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 IL21RQ9HBE5 538 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 SALL4Q9UJQ4 1053 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 WASF3Q9UPY6 502 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 PCDHA13Q9Y5I0 950 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 SNX11Q9Y5W9 270 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 EPN1Q9Y6I3 576 aaPredicted RBP9.84□□□□□ -0.83
RNF4-221ENST00000513643 ARID1BQ8NFD5 2236 aaPredicted RBP9.84□□□□□ -0.83
RNF4-221ENST00000513643 DOCK9Q9BZ29 2069 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 ASPMQ8IZT6 3477 aa9.84□□□□□ -0.83
RNF4-221ENST00000513643 FRYQ5TBA9 3013 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 A0A1W2PQU0 124 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 MED19A0JLT2 244 aaPredicted RBP9.83□□□□□ -0.84
RNF4-221ENST00000513643 RCCD1A6NED2 376 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 BTNL10A8MVZ5 291 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 PRAMEF26H0Y7S4 382 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 KRIT1O00522 736 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 TSPAN6O43657 245 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 PCDHGA12O60330 932 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 OPHN1O60890 802 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 IGSF6O95976 241 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 UGT2B4P06133 528 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 CEACAM1P13688 526 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 KDELR1P24390 212 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 CD38P28907 300 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 MAGEA1P43355 309 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 MAPK8P45983 427 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 RXRGP48443 463 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 SUOXP51687 545 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 NXPH1P58417 271 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 RHOAP61586 193 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 OVGP1Q12889 678 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 SLC10A2Q12908 348 aaPredicted RBP9.83□□□□□ -0.84
RNF4-221ENST00000513643 MESDQ14696 234 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 GRM3Q14832 879 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 TMCO4Q5TGY1 634 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 SEL1L3Q68CR1 1132 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 ALG1LQ6GMV1 187 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 KIAA1161Q6NSJ0 714 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 RAD9BQ6WBX8 426 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 ABI3BPQ7Z7G0 1075 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 SRLQ86TD4 932 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 PRPF39Q86UA1 669 aaKnown RBP9.83□□□□□ -0.84
RNF4-221ENST00000513643 ZSWIM9Q86XI8 627 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 SPATS2Q86XZ4 545 aaKnown RBP9.83□□□□□ -0.84
RNF4-221ENST00000513643 CBARPQ8N350 705 aaPredicted RBP9.83□□□□□ -0.84
RNF4-221ENST00000513643 PGBD5Q8N414 524 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 BAHD1Q8TBE0 780 aaPredicted RBP9.83□□□□□ -0.84
RNF4-221ENST00000513643 MAML1Q92585 1016 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 SERAC1Q96JX3 654 aa9.83□□□□□ -0.84
RNF4-221ENST00000513643 KLHL32Q96NJ5 620 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms