RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ALPIP09923 528 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 ZSCAN22P10073 491 aaPredicted RBP11.12□□□□□ -0.63
DDX41-216ENST00000513562 SYKP43405 635 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 BLKP51451 505 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 HK3P52790 923 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 PPARDQ03181 441 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
DDX41-216ENST00000513562 PDCLQ13371 301 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 CARD16Q5EG05 197 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 CCNJLQ8IV13 435 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 LMO3Q8TAP4 145 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 CMKLR1Q99788 373 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 IGSF5Q9NSI5 407 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 ASNSD1Q9NWL6 643 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 APPL1Q9UKG1 709 aa11.12□□□□□ -0.63
DDX41-216ENST00000513562 BLACEA4D250 179 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 DRGXA6NNA5 263 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 C16orf96A6NNT2 1141 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
DDX41-216ENST00000513562 NEMP1O14524 444 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 AREL1O15033 823 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 ZMPSTE24O75844 475 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 EIF4A3P38919 411 aaKnown RBP11.11□□□□□ -0.63
DDX41-216ENST00000513562 NDUFA8P51970 172 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 MAPK10P53779 464 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
DDX41-216ENST00000513562 SLC20A2Q08357 652 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 NME3Q13232 169 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 OTUD1Q5VV17 481 aaPredicted RBP11.11□□□□□ -0.63
DDX41-216ENST00000513562 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 TFAP2DQ7Z6R9 452 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 SLITRK4Q8IW52 837 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 ARHGEF19Q8IW93 802 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 GPR156Q8NFN8 814 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 OR7D4Q8NG98 312 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 VOPP1Q96AW1 172 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 ARHGEF26Q96DR7 871 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 KREMEN1Q96MU8 473 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 EDEM3Q9BZQ6 932 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 SIK2Q9H0K1 926 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 ZDHHC6Q9H6R6 413 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 ANLNQ9NQW6 1124 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 MBNL1Q9NR56 388 aaKnown RBP11.11□□□□□ -0.63
DDX41-216ENST00000513562 ARHGEF38Q9NXL2 777 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 GPR34Q9UPC5 381 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 PAXBP1Q9Y5B6 917 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 RNF215Q9Y6U7 377 aa11.11□□□□□ -0.63
DDX41-216ENST00000513562 UTP20O75691 2785 aaKnown RBP11.11□□□□□ -0.63
DDX41-216ENST00000513562 DOCK9Q9BZ29 2069 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 NOTCH2Q04721 2471 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 IGLV3-10A0A075B6K4 115 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 ILVBLA1L0T0 632 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 STMND1H3BQB6 276 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 I6L893 689 aaPredicted RBP11.1□□□□□ -0.63
DDX41-216ENST00000513562 MED7O43513 233 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 ADCY5O95622 1261 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 CTSEP14091 401 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 DNA2P51530 1060 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 PMS1P54277 932 aaKnown RBP11.1□□□□□ -0.63
DDX41-216ENST00000513562 ARF5P84085 180 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 NCAPHQ15003 741 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 ALG11Q2TAA5 492 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 COBLL1Q53SF7 1204 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 ZNF805Q5CZA5 627 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 EFHC1Q5JVL4 640 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 CERCAMQ5T4B2 595 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 ZNF783Q6ZMS7 281 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 TMPRSS9Q7Z410 1059 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 SPRED1Q7Z699 444 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 GKN2Q86XP6 184 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 HID1Q8IV36 788 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 PLPP6Q8IY26 295 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 TP53I13Q8NBR0 393 aaPredicted RBP11.1□□□□□ -0.63
DDX41-216ENST00000513562 ZNF606Q8WXB4 792 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 EPAS1Q99814 870 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 TSG101Q99816 390 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 C1QTNF7Q9BXJ2 289 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 PIGVQ9NUD9 493 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 MPP6Q9NZW5 540 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 HECAQ9UBI9 543 aaPredicted RBP11.1□□□□□ -0.63
DDX41-216ENST00000513562 ZNF212Q9UDV6 495 aa11.1□□□□□ -0.63
DDX41-216ENST00000513562 FCF1Q9Y324 198 aaKnown RBP11.1□□□□□ -0.63
DDX41-216ENST00000513562 AGRPO00253 132 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 P4HA2O15460 535 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 DAB1O75553 588 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 GRAP2O75791 330 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 TM7SF2O76062 418 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 LETM1O95202 739 aaPredicted RBP11.09□□□□□ -0.63
DDX41-216ENST00000513562 RASGRP1O95267 797 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 CD160O95971 181 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 KRT5P13647 590 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 PNLIPP16233 465 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 GLB1P16278 677 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 OR1E1P30953 314 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 GKP32189 559 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 PRCPP42785 496 aa11.09□□□□□ -0.63
DDX41-216ENST00000513562 CCR10P46092 362 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms