RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ESRRAP11474 423 aaPredicted RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 MTIF2P46199 727 aaKnown RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 STK19P49842 368 aaPredicted RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 NXPH1P58417 271 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 BPIFB4P59827 614 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 KRT83P78385 493 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 IL9RQ01113 521 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 NME3Q13232 169 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 EIF4EBP2Q13542 120 aaPredicted RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 KCNJ12Q14500 433 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 CPSF6Q16630 551 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP46-208ENST00000512656 TPD52L1Q16890 204 aaPredicted RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 KCNT1Q5JUK3 1230 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 OR6B2Q6IFH4 312 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 NAPEPLDQ6IQ20 393 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 FBXL22Q6P050 247 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 DTX1Q86Y01 620 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 ZDHHC17Q8IUH5 632 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 AADATQ8N5Z0 425 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 MFSD2AQ8NA29 543 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 C1orf131Q8NDD1 294 aaKnown RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 GIMAP7Q8NHV1 300 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 MDM1Q8TC05 714 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 SAP25Q8TEE9 199 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 SHC3Q92529 594 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 PTPRN2Q92932 1015 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 CNDP2Q96KP4 475 aaKnown RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 CPXM1Q96SM3 734 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 PRMT1Q99873 361 aaKnown RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 FEM1AQ9BSK4 669 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 PDCL3Q9H2J4 239 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 KCNF1Q9H3M0 494 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 PREBQ9HCU5 417 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 COX16Q9P0S2 106 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 FOXD3Q9UJU5 478 aaPredicted RBP7.37□□□□□ -1.23
USP46-208ENST00000512656 VPS28Q9UK41 221 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 ASXL3Q9C0F0 2248 aa7.37□□□□□ -1.23
USP46-208ENST00000512656 FLNBO75369 2602 aaKnown RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 LOC100289279A0A1B0GTE1 492 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 A0A1W2PR77 199 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 BECN2A8MW95 431 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 C10orf142B7Z368 130 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 PRAMEF26H0Y7S4 382 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 MCF2LO15068 1137 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 PLRG1O43660 514 aaKnown RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 DAB1O75553 588 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 RFPL3O75679 317 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 GRAP2O75791 330 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 TIAF1O95411 115 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 F9P00740 461 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 WNT1P04628 370 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 JUPP14923 745 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 SLC9A1P19634 815 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 EPHA8P29322 1005 aaPredicted RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 DRD3P35462 400 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 RXRGP48443 463 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 CDH4P55283 916 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 PITX1P78337 314 aaPredicted RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 SLC6A3Q01959 620 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 CYP4F3Q08477 520 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 ILKQ13418 452 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 AUHQ13825 339 aaKnown RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 STAT4Q14765 748 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 TAF5Q15542 800 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 DLG2Q15700 870 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 SETMARQ53H47 684 aaPredicted RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 HS1BP3Q53T59 392 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 BRMS1LQ5PSV4 323 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 EXOSC6Q5RKV6 272 aaKnown RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 PRAMEF14Q5SWL7 426 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 CXorf57Q6NSI4 855 aaKnown RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 NEK5Q6P3R8 708 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 GJB7Q6PEY0 223 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 C19orf48Q6RUI8 117 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 OLFML1Q6UWY5 402 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 DHRS13Q6UX07 377 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 LRRC31Q6UY01 552 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 FAM183BPQ6ZVS7 135 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 SLC26A9Q7LBE3 791 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 PDZD3Q86UT5 571 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 TRIM69Q86WT6 500 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 CIR1Q86X95 450 aaPredicted RBP7.36□□□□□ -1.23
USP46-208ENST00000512656 GATAD2AQ86YP4 633 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 PASD1Q8IV76 773 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 FAM114A1Q8IWE2 563 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 WDTC1Q8N5D0 677 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 EID2Q8N6I1 236 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 MLKLQ8NB16 471 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 TMEM35BQ8NCS4 154 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 MSANTD4Q8NCY6 345 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 PIP4K2CQ8TBX8 421 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 FRS2Q8WU20 508 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 FAM131CQ96AQ9 280 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 NXPE2Q96DL1 559 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 SIK2Q9H0K1 926 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 WDCPQ9H6R7 721 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 EBF2Q9HAK2 575 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 ACP6Q9NPH0 428 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms