RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 COMTP21964 271 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 FECHP22830 423 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 GRIA4P48058 902 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 C21orf59P57076 290 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 RACK1P63244 317 aaKnown RBP16.12■□□□□ 0.17
DDX41-214ENST00000512334 ZNF235Q14590 738 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 RFTN1Q14699 578 aaPredicted RBP16.12■□□□□ 0.17
DDX41-214ENST00000512334 LBRQ14739 615 aaKnown RBP16.12■□□□□ 0.17
DDX41-214ENST00000512334 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 TMCO4Q5TGY1 634 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 NCBP2-AS2Q69YL0 99 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 RAD9BQ6WBX8 426 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 TSEN2Q8NCE0 465 aaKnown RBP16.12■□□□□ 0.17
DDX41-214ENST00000512334 PCDH19Q8TAB3 1148 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 KLK6Q92876 244 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 ZNF599Q96NL3 588 aa16.12■□□□□ 0.17
DDX41-214ENST00000512334 NEMP1O14524 444 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 LATO43561 262 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 BUB1BO60566 1050 aaPredicted RBP16.11■□□□□ 0.17
DDX41-214ENST00000512334 MAP3K6O95382 1288 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 CER1O95813 267 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 KDELR1P24390 212 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 RGRP47804 291 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 RENBPP51606 427 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 NAP1L1P55209 391 aaKnown RBP16.11■□□□□ 0.17
DDX41-214ENST00000512334 SLC10A7Q0GE19 358 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 GRM3Q14832 879 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 SETMARQ53H47 684 aaPredicted RBP16.11■□□□□ 0.17
DDX41-214ENST00000512334 SLC45A4Q5BKX6 768 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 LRRC73Q5JTD7 316 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 NEK5Q6P3R8 708 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 IL27RAQ6UWB1 636 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 HORMAD1Q86X24 394 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 RHOT1Q8IXI2 618 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 BBS5Q8N3I7 341 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 PAF1Q8N7H5 531 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.11■□□□□ 0.17
DDX41-214ENST00000512334 SKA1Q96BD8 255 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 MYOCQ99972 504 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 CPEB1Q9BZB8 566 aaKnown RBP16.11■□□□□ 0.17
DDX41-214ENST00000512334 GAREM1Q9H706 876 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 SEPT3Q9UH03 358 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 ANKRD6Q9Y2G4 727 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 FADS3Q9Y5Q0 445 aa16.11■□□□□ 0.17
DDX41-214ENST00000512334 SHROOM3Q8TF72 1996 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 A0A0A6YYK5 440 aaPredicted RBP16.1■□□□□ 0.17
DDX41-214ENST00000512334 WNT9AO14904 365 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 SLC31A1O15431 190 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 MAFKO60675 156 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 PRLRP16471 622 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 XPAP23025 273 aaPredicted RBP16.1■□□□□ 0.17
DDX41-214ENST00000512334 CD38P28907 300 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 NUDT1P36639 197 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 ABL2P42684 1182 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 SCNN1BP51168 640 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 HADHBP55084 474 aaKnown RBP16.1■□□□□ 0.17
DDX41-214ENST00000512334 BNC1Q01954 994 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 PAFAH1B3Q15102 231 aaKnown RBP16.1■□□□□ 0.17
DDX41-214ENST00000512334 KIF19Q2TAC6 998 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 HLA-BQ31612 363 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 LRRC38Q5VT99 294 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 SEL1L3Q68CR1 1132 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 NAPEPLDQ6IQ20 393 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 KIAA1328Q86T90 577 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 SRLQ86TD4 932 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 TTC7BQ86TV6 843 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 ACRBPQ8NEB7 543 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 RAB7BQ96AH8 199 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 RNF25Q96BH1 459 aaPredicted RBP16.1■□□□□ 0.17
DDX41-214ENST00000512334 FAF2Q96CS3 445 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 FEM1CQ96JP0 617 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 MAK16Q9BXY0 300 aaKnown RBP16.1■□□□□ 0.17
DDX41-214ENST00000512334 GOLPH3Q9H4A6 298 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 DDX56Q9NY93 547 aaKnown RBP16.1■□□□□ 0.17
DDX41-214ENST00000512334 DMTF1Q9Y222 760 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 ITM2BQ9Y287 266 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 SNX11Q9Y5W9 270 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 ALG6Q9Y672 507 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 SPTBN4Q9H254 2564 aa16.1■□□□□ 0.17
DDX41-214ENST00000512334 DCHS1Q96JQ0 3298 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 C10orf142B7Z368 130 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 MUSKO15146 869 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 VILLO15195 856 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 AP1G1O43747 822 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 RPS21P63220 83 aaKnown RBP16.09■□□□□ 0.17
DDX41-214ENST00000512334 GALNT2Q10471 571 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 STAT4Q14765 748 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 ZNF284Q2VY69 593 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 KIAA1161Q6NSJ0 714 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 CAMK1DQ8IU85 385 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 LRRC49Q8IUZ0 686 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 PQLC3Q8N755 202 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 VOPP1Q96AW1 172 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 ZNF830Q96NB3 372 aaPredicted RBP16.09■□□□□ 0.17
DDX41-214ENST00000512334 RNF157Q96PX1 679 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 PSKH2Q96QS6 385 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 TUBGCP5Q96RT8 1024 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 SUV39H2Q9H5I1 410 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 ATP13A3Q9H7F0 1226 aa16.09■□□□□ 0.17
DDX41-214ENST00000512334 FZD3Q9NPG1 666 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms