RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 OSBPL2Q9H1P3 480 aa10.72□□□□□ -0.69
PDLIM5-217ENST00000512274 EPB41L5Q9HCM4 733 aa10.72□□□□□ -0.69
PDLIM5-217ENST00000512274 OLA1Q9NTK5 396 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-217ENST00000512274 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.72□□□□□ -0.69
PDLIM5-217ENST00000512274 AP4E1Q9UPM8 1137 aa10.72□□□□□ -0.69
PDLIM5-217ENST00000512274 HEMK1Q9Y5R4 338 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-217ENST00000512274 KNTC1P50748 2209 aa10.72□□□□□ -0.69
PDLIM5-217ENST00000512274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 E2F8A0AVK6 867 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 PRRT4C9JH25 899 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 PIK3R2O00459 728 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 IRAK2O43187 625 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 RFPL3O75679 317 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 LDOC1O95751 146 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 SLC2A3P11169 496 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ITIH2P19823 946 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 IVDP26440 423 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 STIP1P31948 543 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ADRA1BP35368 520 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 PPP3CCP48454 512 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 YWHAGP61981 247 aaKnown RBP eCLIP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 DEUP1Q05D60 604 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 TBC1D25Q3MII6 688 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ARL13BQ3SXY8 428 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 KCNT1Q5JUK3 1230 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 PRAMEF14Q5SWL7 426 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 SYPL2Q5VXT5 272 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 KIAA1614Q5VZ46 1190 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 GRAMD4Q6IC98 578 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 C4orf22Q6V702 233 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 DENND5BQ6ZUT9 1274 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 HDXQ7Z353 690 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 SCD5Q86SK9 330 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 RELL1Q8IUW5 271 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 PDZD8Q8NEN9 1154 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 CADM4Q8NFZ8 388 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 C1orf216Q8TAB5 229 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 CNDP2Q96KP4 475 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 SERPINB11Q96P15 392 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 HAPLN3Q96S86 360 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 FAM117AQ9C073 453 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 RETREG1Q9H6L5 497 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ZWILCHQ9H900 591 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 PCDH9Q9HC56 1237 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ITM2CQ9NQX7 267 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ZDHHC18Q9NUE0 388 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 DNAJC17Q9NVM6 304 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ZNF446Q9NWS9 450 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ARHGEF38Q9NXL2 777 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 USP36Q9P275 1121 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 TBC1D14Q9P2M4 693 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 ANKMY1Q9P2S6 941 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 PCSK1NQ9UHG2 260 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 NAALADL1Q9UQQ1 740 aa10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 R3HDM2Q9Y2K5 976 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-217ENST00000512274 HACD1B0YJ81 288 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 M0QYT0 321 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 PCDHGA12O60330 932 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 CST8O60676 142 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 MYBL2P10244 700 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 IRF1P10914 325 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 HSPA9P38646 679 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 TUBP50607 506 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 TPMTP51580 245 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 AFF3P51826 1226 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 NFKB2Q00653 900 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 SLC7A5Q01650 507 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 ADCY2Q08462 1091 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 PAFAH1B3Q15102 231 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 TEAD4Q15561 434 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 CDO1Q16878 200 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 FUT11Q495W5 492 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 ANKRD20A8PQ5CZ79 823 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 EFHC2Q5JST6 749 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 CEP128Q6ZU80 1094 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 SND1Q7KZF4 910 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 BBS7Q8IWZ6 715 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 PQLC3Q8N755 202 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 PLD5Q8N7P1 536 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 ZNF248Q8NDW4 579 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 PCDH19Q8TAB3 1148 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 ACTL9Q8TC94 416 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 IGSF8Q969P0 613 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 LRRC45Q96CN5 670 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 SLC39A13Q96H72 371 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 CSPG4P5Q96PW8 444 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 GABRG3Q99928 467 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 HEMGNQ9BXL5 484 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 MKRN2Q9H000 416 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 BRD8Q9H0E9 1235 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 SPHK2Q9NRA0 654 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 PIGVQ9NUD9 493 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 GRHL1Q9NZI5 618 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 STARD13Q9Y3M8 1113 aa10.7□□□□□ -0.7
PDLIM5-217ENST00000512274 PCDHGA1Q9Y5H4 931 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms