RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 APPL1Q9UKG1 709 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 ITM2BQ9Y287 266 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 KCNMB2Q9Y691 235 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 LRP4O75096 1905 aa9.29□□□□□ -0.92
NUP54-211ENST00000512151 TCP11X1B4DZS4 312 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 GOLGA6L22H0YM25 854 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 B4GAT1O43505 415 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 SNAP91O60641 907 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 ADRB3P13945 408 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 RECQLP46063 649 aaPredicted RBP9.28□□□□□ -0.92
NUP54-211ENST00000512151 RGS7P49802 495 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 B4GALNT1Q00973 533 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 CENPCQ03188 943 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 CUL4BQ13620 913 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 CERCAMQ5T4B2 595 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 C16orf46Q6P387 395 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 LVRNQ6Q4G3 990 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 SIX6OS1Q8N1H7 587 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 SCML4Q8N228 414 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 ART4Q93070 314 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 TSACCQ96A04 125 aaPredicted RBP9.28□□□□□ -0.92
NUP54-211ENST00000512151 CENPTQ96BT3 561 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 MOCOSQ96EN8 888 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 FEM1CQ96JP0 617 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 PRMT1Q99873 361 aaKnown RBP9.28□□□□□ -0.92
NUP54-211ENST00000512151 NUDT22Q9BRQ3 303 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 FEM1AQ9BSK4 669 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 SPRY4Q9C004 299 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 UNKQ9C0B0 810 aaKnown RBP9.28□□□□□ -0.92
NUP54-211ENST00000512151 GPN2Q9H9Y4 310 aaPredicted RBP9.28□□□□□ -0.92
NUP54-211ENST00000512151 DYRK4Q9NR20 520 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 MBNL1Q9NR56 388 aaKnown RBP9.28□□□□□ -0.92
NUP54-211ENST00000512151 TSPAN16Q9UKR8 245 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 DOLKQ9UPQ8 538 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 TLR6Q9Y2C9 796 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 MRPS18BQ9Y676 258 aaKnown RBP9.28□□□□□ -0.92
NUP54-211ENST00000512151 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
NUP54-211ENST00000512151 IGHV5-10-1A0A0J9YXX1 117 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 A0A1B0GTL3 188 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 ARHGAP10A1A4S6 786 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 CAPN5O15484 640 aaPredicted RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 LEFTY1O75610 366 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 LTFP02788 710 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 RRM1P23921 792 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 ABL2P42684 1182 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 NEK3P51956 506 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 THOP1P52888 689 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 PPARDQ03181 441 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 PPP3CAQ08209 521 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 BST2Q10589 180 aaKnown RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 SGCGQ13326 291 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 SEPT6Q14141 434 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 ALG11Q2TAA5 492 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 NADK2Q4G0N4 442 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 MACC1Q6ZN28 852 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 PARS2Q7L3T8 475 aaKnown RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 TIPARPQ7Z3E1 657 aaKnown RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 TAC4Q86UU9 113 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 HID1Q8IV36 788 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 CCDC13Q8IYE1 715 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 FSTL5Q8N475 847 aaPredicted RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 PRR7Q8TB68 274 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 KCTD13Q8WZ19 329 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 STARD8Q92502 1023 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 SEMA4DQ92854 862 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 CCDC74BQ96LY2 380 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 TIGD1Q96MW7 591 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 PSMB7Q99436 277 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 SRRTQ9BXP5 876 aaKnown RBP9.27□□□□□ -0.93
NUP54-211ENST00000512151 EDEM3Q9BZQ6 932 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 BLZF1Q9H2G9 400 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 TNKS2Q9H2K2 1166 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 CNGB3Q9NQW8 809 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 CISHQ9NSE2 258 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 USP25Q9UHP3 1055 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 KCND3Q9UK17 655 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 TLK1Q9UKI8 766 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 PILRAQ9UKJ1 303 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 HS3ST2Q9Y278 367 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 SVILO95425 2214 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 CROCCQ5TZA2 2017 aa9.27□□□□□ -0.93
NUP54-211ENST00000512151 ARHGEF17Q96PE2 2063 aaPredicted RBP9.26□□□□□ -0.93
NUP54-211ENST00000512151 MKRN2OSH3BPM6 223 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 AP1G1O43747 822 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 KLRC4O43908 158 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 ZNF821O75541 412 aaPredicted RBP9.26□□□□□ -0.93
NUP54-211ENST00000512151 SORBS2O94875 1100 aaKnown RBP9.26□□□□□ -0.93
NUP54-211ENST00000512151 PRNPP04156 253 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 FURINP09958 794 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 TRIM49P0CI25 452 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 TRIM49CP0CI26 452 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 GCLMP48507 274 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 HK3P52790 923 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 SLC8A3P57103 927 aa9.26□□□□□ -0.93
NUP54-211ENST00000512151 PITX1P78337 314 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms