RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 HOXA11P31270 313 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 AKT1P31749 480 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 STIP1P31948 543 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPP1R2P41236 205 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 NDST1P52848 882 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PITX1P78337 314 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DAB2P98082 770 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT76Q01546 638 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCLAFQ15004 111 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CLPPQ16740 277 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGAP44Q17R89 818 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZACNQ401N2 412 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLHL22Q53GT1 634 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 XKR7Q5GH72 579 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FYB2Q5VWT5 728 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 NXNQ6DKJ4 435 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RINT1Q6NUQ1 792 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC30A6Q6NXT4 461 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLHL24Q6TFL4 600 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TIFABQ6ZNK6 161 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM47EQ6ZV65 393 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF365Q70YC5 407 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SND1Q7KZF4 910 aaKnown RBP eCLIP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GSTA5Q7RTV2 222 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RCOR2Q8IZ40 523 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CNTD1Q8N815 330 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DMBX1Q8NFW5 382 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MOSPD2Q8NHP6 518 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPATA18Q8TC71 538 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADAMTS19Q8TE59 1207 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGEF2Q92974 986 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPWD1Q96BP3 646 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 C18orf8Q96DM3 657 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PABPC5Q96DU9 382 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DYNLL2Q96FJ2 89 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CEP95Q96GE4 821 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPP1R10Q96QC0 940 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DCLRE1CQ96SD1 692 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ORAI3Q9BRQ5 295 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SAP130Q9H0E3 1048 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DUSP15Q9H1R2 295 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLHL31Q9H511 634 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DHX33Q9H6R0 707 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MLXIPLQ9NP71 852 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRPC4Q9UBN4 977 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DPP7Q9UHL4 492 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLCO3A1Q9UIG8 710 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GTF3C4Q9UKN8 822 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FBXO4Q9UKT5 387 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 OAS3Q9Y6K5 1087 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LPAP08519 4548 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACACAQ13085 2346 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACANP16112 2415 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DYNC1H1Q14204 4646 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MEI4A8MW99 385 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 H0YCG3 227 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDK2AP1O14519 115 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ENPP3O14638 875 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 NPC1O15118 1278 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PEX1O43933 1283 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZMPSTE24O75844 475 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CHEK2O96017 543 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 APOA1P02647 267 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABHD2P08910 425 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KITP10721 976 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 BRD2P25440 801 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 IL12AP29459 219 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GNA11P29992 359 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GNL1P36915 607 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EFNA3P52797 238 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CLNS1AP54105 237 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EIF6P56537 245 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 NOMO3P69849 1222 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GUCY1B3Q02153 619 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 BDH1Q02338 343 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MVKQ03426 396 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DEUP1Q05D60 604 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLC1Q07866 573 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 C2orf54Q08AI8 447 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TWF1Q12792 350 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDC16Q13042 620 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRPL28Q13084 256 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 STX3Q13277 289 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRR1Q13601 381 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TAF5Q15542 800 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPP1R3AQ16821 1122 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GAB4Q2WGN9 574 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARSJQ5FYB0 599 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CATSPEREQ5SY80 951 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMCO4Q5TGY1 634 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EMBQ6PCB8 327 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC39A5Q6ZMH5 540 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RASSF6Q6ZTQ3 369 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMC6Q7Z403 805 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CALHM3Q86XJ0 350 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 VSIG1Q86XK7 387 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADHFE1Q8IWW8 467 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM192Q8IY95 271 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TAGAPQ8N103 731 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms