RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RNASEH2AO75792 299 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 MED26O95402 600 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 NFATC1O95644 943 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CCDC166P0CW27 439 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CDH3P22223 829 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ARL3P36405 182 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SRP54P61011 504 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 RAB2AP61019 212 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SMAD3P84022 425 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 CBX2Q14781 532 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 SF1Q15637 639 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 MPPE1Q53F39 396 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GPR158Q5T848 1215 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 OLFML2AQ68BL7 652 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SPOCD1Q6ZMY3 1216 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SLC26A11Q86WA9 606 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 OR14C36Q8NHC7 312 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ARNTL2Q8WYA1 636 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TEKT5Q96M29 485 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 POP1Q99575 1024 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 POPDC2Q9HBU9 364 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TMEM216Q9P0N5 145 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 HEY2Q9UBP5 337 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ZNF510Q9Y2H8 683 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 MRPS7Q9Y2R9 242 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 RWDD3Q9Y3V2 267 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 UBE2QL1A1L167 161 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 USP27XA6NNY8 438 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ZNF208O43345 1280 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 RAD51CO43502 376 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GMFGO60234 142 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 RARGP13631 454 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 NQO1P15559 274 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 AP1S2P56377 157 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 MRPS6P82932 125 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 OC90Q02509 493 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 NAA30Q147X3 362 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 PTGES3Q15185 160 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 GRTP1Q5TC63 336 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PDPK2PQ6A1A2 396 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ADGRA1Q86SQ6 560 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 FAM83AQ86UY5 434 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TERB1Q8NA31 727 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 OR2W6PQ8NHA6 318 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TRAPPC12Q8WVT3 735 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TAPBPLQ9BX59 468 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ULBP1Q9BZM6 244 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 C6orf62Q9GZU0 229 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 POLLQ9UGP5 575 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ANGPT4Q9Y264 503 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GPC6Q9Y625 555 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 NRCAMQ92823 1304 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 NEDD8-MDP1E9PL57 170 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 WRBO00258 174 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 FOXN3O00409 490 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 KMOO15229 486 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TRIM3O75382 744 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 RECQL4O94761 1208 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 LAG3P18627 525 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 AMPD1P23109 780 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 KLRK1P26718 216 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GDI2P50395 445 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 ZNF135P52742 658 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 SULT2A1Q06520 285 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SLC29A2Q14542 456 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TAB1Q15750 504 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 LYPLAL1Q5VWZ2 237 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 MZT2AQ6P582 158 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ATG4AQ8WYN0 398 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 HERVK_113Q902F9 699 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PMM1Q92871 262 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CATSPER2Q96P56 530 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ZSWIM1Q9BR11 485 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TMEM121Q9BTD3 319 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GRIP2Q9C0E4 1043 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 DPEP2Q9H4A9 486 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PTGFRNQ9P2B2 879 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CROTQ9UKG9 612 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CHKBQ9Y259 395 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TPRKBQ9Y3C4 175 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PCDHA3Q9Y5H8 950 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PHRF1Q9P1Y6 1649 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 TRBV23OR9-2A0A075B6M9 112 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 CLDN4O14493 209 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 DNALI1O14645 258 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 PDE9AO76083 593 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 DNASE1L1P49184 302 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 RAB25P57735 213 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SMIM11AP58511 58 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 PLGLB1Q02325 96 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 MCL1Q07820 350 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TARBP2Q15633 366 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 TREML1Q86YW5 311 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 FAM98AQ8NCA5 519 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 HTR3CQ8WXA8 447 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ZHX1-C8orf76Q96EF9 292 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SEC16BQ96JE7 1060 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ASB2Q96Q27 587 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TBCBQ99426 244 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SLC38A3Q99624 504 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms