RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PRMT8Q9NR22 394 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-228ENST00000511676 NDFIP2Q9NV92 336 aa9.25□□□□□ -0.93
NR1I3-228ENST00000511676 HCFC1R1Q9NWW0 138 aa9.25□□□□□ -0.93
NR1I3-228ENST00000511676 SMPD4Q9NXE4 827 aa9.25□□□□□ -0.93
NR1I3-228ENST00000511676 NINJ2Q9NZG7 142 aa9.25□□□□□ -0.93
NR1I3-228ENST00000511676 SEPT3Q9UH03 358 aa9.25□□□□□ -0.93
NR1I3-228ENST00000511676 TEX264Q9Y6I9 313 aa9.25□□□□□ -0.93
NR1I3-228ENST00000511676 GOLGA6L7A0A1B0GV03 622 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 HMGB1P1B2RPK0 211 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 AGPSO00116 658 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 ZBTB24O43167 697 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 JCHAINP01591 159 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 MYZAPP0CAP1 466 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 IRF1P10914 325 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 NFKB1P19838 968 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 PSMB4P28070 264 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 ATP5DP30049 168 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 GDI1P31150 447 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 DPP6P42658 865 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 MAPK8P45983 427 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 NPY2RP49146 381 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 LMAN1P49257 510 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 IRAK1P51617 712 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 RPS24P62847 133 aaKnown RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 FOXK1P85037 733 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 ZXDBP98169 803 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 ZNF844Q08AG5 666 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 IFFO1Q0D2I5 559 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CDH17Q12864 832 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 NR1H3Q13133 447 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 NAB1Q13506 487 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CDH18Q13634 790 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 LAMB3Q13751 1172 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 SIM2Q14190 667 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 SLC29A2Q14542 456 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 TEAD2Q15562 447 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CSRP2Q16527 193 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 FBXO43Q4G163 708 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 PREPLQ4J6C6 727 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 AGBL2Q5U5Z8 902 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 ZNF534Q76KX8 674 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CEP68Q76N32 757 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 PRUNE1Q86TP1 453 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CAND1Q86VP6 1230 aaKnown RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 PLPP6Q8IY26 295 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 ZBED8Q8IZ13 594 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CAMKK1Q8N5S9 505 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 ITFG1Q8TB96 612 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 USP13Q92995 863 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 IMP4Q96G21 291 aaKnown RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 GDAP1L1Q96MZ0 367 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 KXD1Q9BQD3 176 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 MGME1Q9BQP7 344 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 POLR1EQ9GZS1 481 aaKnown RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 IL22Q9GZX6 179 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CASS4Q9NQ75 786 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 RBM22Q9NW64 420 aaKnown RBP eCLIP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 SEPT10Q9P0V9 454 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-228ENST00000511676 PCDHGA5Q9Y5G8 931 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 OR51B4Q9Y5P0 310 aa9.24□□□□□ -0.93
NR1I3-228ENST00000511676 CHD5Q8TDI0 1954 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 TCRBV7S3A2A0A539 114 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 SDR42E2A6NKP2 422 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 A6NNZ2 444 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 H0Y626 953 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 HOXC11O43248 304 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-228ENST00000511676 TBL1XO60907 577 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 CDH16O75309 829 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 CA4P22748 312 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 STX2P32856 288 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 CSNK1DP48730 415 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 SULT2A1Q06520 285 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 NSUN2Q08J23 767 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-228ENST00000511676 GRSF1Q12849 480 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-228ENST00000511676 ZNF235Q14590 738 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 KLHL38Q2WGJ6 581 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 FNBP1LQ5T0N5 605 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 EMC10Q5UCC4 262 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 STEAP4Q687X5 459 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 RETSATQ6NUM9 610 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 NUDT18Q6ZVK8 323 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 MFN1Q8IWA4 741 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 BBS7Q8IWZ6 715 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-228ENST00000511676 PEX13Q92968 403 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 ISG20Q96AZ6 181 aaKnown RBP9.23□□□□□ -0.93
NR1I3-228ENST00000511676 TCEAL4Q96EI5 215 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 MYEOVQ96EZ4 313 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 SIGLEC10Q96LC7 697 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 AGAP3Q96P47 875 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 EBNA1BP2Q99848 306 aaKnown RBP9.23□□□□□ -0.93
NR1I3-228ENST00000511676 C19orf43Q9BQ61 176 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 FEM1AQ9BSK4 669 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 ACSS3Q9H6R3 686 aa9.23□□□□□ -0.93
NR1I3-228ENST00000511676 MRM3Q9HC36 420 aaKnown RBP9.23□□□□□ -0.93
NR1I3-228ENST00000511676 ATP13A1Q9HD20 1204 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms