RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PLXNA2O75051 1894 aa13.03□□□□□ -0.32
COL6A6-203ENST00000511332 LRRK1Q38SD2 2015 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.02□□□□□ -0.33
COL6A6-203ENST00000511332 LRRC72A6NJI9 287 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 KCNK3O14649 394 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 UGT2B4P06133 528 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 DPP6P42658 865 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 RGRP47804 291 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 NEK3P51956 506 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 METAP1P53582 386 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 ADPRHP54922 357 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 CNTN1Q12860 1018 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 AGBL4Q5VU57 503 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 ALG1LQ6GMV1 187 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 AADACL2Q6P093 401 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 GDPD4Q6W3E5 623 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 ERN2Q76MJ5 926 aaKnown RBP13.02□□□□□ -0.33
COL6A6-203ENST00000511332 SRLQ86TD4 932 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 CDKL3Q8IVW4 592 aaPredicted RBP13.02□□□□□ -0.33
COL6A6-203ENST00000511332 FRMD1Q8N878 549 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 SUMF1Q8NBK3 374 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 CADM4Q8NFZ8 388 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 OR2T34Q8NGX1 318 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 FOXJ1Q92949 421 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 LOXL4Q96JB6 756 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.33
COL6A6-203ENST00000511332 DUSP15Q9H1R2 295 aaPredicted RBP13.02□□□□□ -0.33
COL6A6-203ENST00000511332 KDM4CQ9H3R0 1056 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 NT5MQ9NPB1 228 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 SAE1Q9UBE0 346 aaPredicted RBP13.02□□□□□ -0.33
COL6A6-203ENST00000511332 GMEB2Q9UKD1 530 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 TPX2Q9ULW0 747 aaKnown RBP13.02□□□□□ -0.33
COL6A6-203ENST00000511332 TTLL3Q9Y4R7 772 aa13.02□□□□□ -0.33
COL6A6-203ENST00000511332 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 MEI4A8MW99 385 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 KCNK1O00180 336 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 MUSKO15146 869 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 SOCS5O75159 536 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ADRB3P13945 408 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 CR2P20023 1033 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 CA4P22748 312 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 CES1P23141 567 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 GKP32189 559 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ACSL1P33121 698 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 SCNN1BP51168 640 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 SUOXP51687 545 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 BCL2L1Q07817 233 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ITKQ08881 620 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 KLF1Q13351 362 aaPredicted RBP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 SLC45A4Q5BKX6 768 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ZNF569Q5MCW4 686 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 PIP5KL1Q5T9C9 394 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 LYSMD4Q5XG99 296 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 BRAT1Q6PJG6 821 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 PARS2Q7L3T8 475 aaKnown RBP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ZC3H18Q86VM9 953 aaKnown RBP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 TMEFF1Q8IYR6 380 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 PGBD5Q8N414 524 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 PAF1Q8N7H5 531 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 OR14C36Q8NHC7 312 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ACTL9Q8TC94 416 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 HCAR2Q8TDS4 363 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 RAB7BQ96AH8 199 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ARRDC3Q96B67 414 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 ZNF419Q96HQ0 510 aaPredicted RBP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 HSPA12BQ96MM6 686 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 KLHL32Q96NJ5 620 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 IL12RB2Q99665 862 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 HERPUD2Q9BSE4 406 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 GPR174Q9BXC1 333 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 TLR10Q9BXR5 811 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 NEUROG2Q9H2A3 272 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 PREBQ9HCU5 417 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 RBM22Q9NW64 420 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL6A6-203ENST00000511332 SEPT10Q9P0V9 454 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 DKK3Q9UBP4 350 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
COL6A6-203ENST00000511332 TRPM6Q9BX84 2022 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 A0A1W2PQ67 120 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 TSPAN11A1L157 253 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 C16orf96A6NNT2 1141 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 USP27XA6NNY8 438 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 H7C0C1 242 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 INSIG1O15503 277 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 STK10O94804 968 aaKnown RBP13□□□□□ -0.33
COL6A6-203ENST00000511332 EPN2O95208 641 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 PIGNO95427 931 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 HLA-DQB2P05538 268 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 XPAP23025 273 aaPredicted RBP13□□□□□ -0.33
COL6A6-203ENST00000511332 ATP5OP48047 213 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 DHPSP49366 369 aaPredicted RBP13□□□□□ -0.33
COL6A6-203ENST00000511332 EIF3EP60228 445 aaKnown RBP13□□□□□ -0.33
COL6A6-203ENST00000511332 MAXP61244 160 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 ZBTB17Q13105 803 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 LPAL2Q16609 132 aa13□□□□□ -0.33
COL6A6-203ENST00000511332 WDR45BQ5MNZ6 344 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms