RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PRPSAP2O60256 369 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 LDOC1O95751 146 aaPredicted RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 NDST2P52849 883 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 RAD51Q06609 339 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 CCDC157Q569K6 752 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 GDPD4Q6W3E5 623 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 CCNI2Q6ZMN8 369 aaPredicted RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 CYP4V2Q6ZWL3 525 aaPredicted RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 ABI3BPQ7Z7G0 1075 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 ZSCAN30Q86W11 494 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 ZCCHC14Q8WYQ9 949 aaKnown RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 SYN2Q92777 582 aaPredicted RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 CNDP2Q96KP4 475 aaKnown RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 CALN1Q9BXU9 219 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 MRPL47Q9HD33 250 aaKnown RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 LHX3Q9UBR4 397 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 ITM2BQ9Y287 266 aa23.3■■□□□ 1.32
SNF8-209ENST00000510558 BZW2Q9Y6E2 419 aaKnown RBP23.3■■□□□ 1.32
SNF8-209ENST00000510558 NEMP1O14524 444 aa23.29■■□□□ 1.32
SNF8-209ENST00000510558 TSPAN6O43657 245 aa23.29■■□□□ 1.32
SNF8-209ENST00000510558 LRCH4O75427 683 aa23.29■■□□□ 1.32
SNF8-209ENST00000510558 PAK4O96013 591 aaPredicted RBP23.29■■□□□ 1.32
SNF8-209ENST00000510558 TMPRSS7Q7RTY8 843 aa23.29■■□□□ 1.32
SNF8-209ENST00000510558 CELF6Q96J87 481 aaKnown RBP23.29■■□□□ 1.32
SNF8-209ENST00000510558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.29■■□□□ 1.32
SNF8-209ENST00000510558 PDFQ9HBH1 243 aa23.29■■□□□ 1.32
SNF8-209ENST00000510558 UBA2Q9UBT2 640 aaPredicted RBP23.29■■□□□ 1.32
SNF8-209ENST00000510558 GGT7Q9UJ14 662 aa23.29■■□□□ 1.32
SNF8-209ENST00000510558 HS3ST3A1Q9Y663 406 aa23.29■■□□□ 1.32
SNF8-209ENST00000510558 A6NNZ2 444 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 SPINT1O43278 529 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 DAPK3O43293 454 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 SDC3O75056 442 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 ZBED6P86452 979 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 CYTH1Q15438 398 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 ZSCAN23Q3MJ62 389 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 PPP6R3Q5H9R7 873 aaPredicted RBP23.28■■□□□ 1.32
SNF8-209ENST00000510558 RFX8Q6ZV50 586 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 PTAR1Q7Z6K3 402 aaPredicted RBP23.28■■□□□ 1.32
SNF8-209ENST00000510558 VPS36Q86VN1 386 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 PSTKQ8IV42 348 aaKnown RBP23.28■■□□□ 1.32
SNF8-209ENST00000510558 FAM174AQ8TBP5 190 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 CPLX3Q8WVH0 158 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 ARHGEF26Q96DR7 871 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 IQCDQ96DY2 449 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 EXOC2Q96KP1 924 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 NCAPGQ9BPX3 1015 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 C1QTNF2Q9BXJ5 285 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 SLC39A8Q9C0K1 460 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 KLHL11Q9NVR0 708 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 CAPN11Q9UMQ6 739 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 MFHAS1Q9Y4C4 1052 aa23.28■■□□□ 1.32
SNF8-209ENST00000510558 GOLGA4Q13439 2230 aaKnown RBP23.28■■□□□ 1.32
SNF8-209ENST00000510558 ANKRD36A6QL64 1941 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 IGLON5A6NGN9 336 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 ARHGAP42A6NI28 874 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 J3KR12 359 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 RAD51BO15315 384 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 PRAMEF11O60813 436 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 SERPING1P05155 500 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 ERCC2P18074 760 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 SGCGQ13326 291 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 LRRC73Q5JTD7 316 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 KYAT3Q6YP21 454 aaKnown RBP23.27■■□□□ 1.32
SNF8-209ENST00000510558 Q6ZSR6 202 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 SLC22A18ASQ8N1D0 253 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 BMFQ96LC9 184 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 IFNKQ9P0W0 207 aa23.27■■□□□ 1.32
SNF8-209ENST00000510558 POM121BA6NF01 834 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 AREL1O15033 823 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 INSIG1O15503 277 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 PCK1P35558 622 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 PAPOLAP51003 745 aaKnown RBP23.26■■□□□ 1.31
SNF8-209ENST00000510558 ZNF135P52742 658 aaPredicted RBP23.26■■□□□ 1.31
SNF8-209ENST00000510558 DNAJC3Q13217 504 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 ACAP1Q15027 740 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 DHRS13Q6UX07 377 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 TTC7BQ86TV6 843 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 ARHGAP12Q8IWW6 846 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 GALNT15Q8N3T1 639 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 LENG8Q96PV6 779 aaPredicted RBP23.26■■□□□ 1.31
SNF8-209ENST00000510558 KLF6Q99612 283 aaPredicted RBP23.26■■□□□ 1.31
SNF8-209ENST00000510558 CPEB1Q9BZB8 566 aaKnown RBP23.26■■□□□ 1.31
SNF8-209ENST00000510558 DKK3Q9UBP4 350 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 PCDHGA1Q9Y5H4 931 aa23.26■■□□□ 1.31
SNF8-209ENST00000510558 LRRK1Q38SD2 2015 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 GYPCP04921 128 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 IL1R2P27930 398 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 AFMIDQ63HM1 303 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 DCP2Q8IU60 420 aaKnown RBP23.25■■□□□ 1.31
SNF8-209ENST00000510558 NPWQ8N729 165 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 ASB12Q8WXK4 309 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 THAP2Q9H0W7 228 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 GPR27Q9NS67 375 aa23.25■■□□□ 1.31
SNF8-209ENST00000510558 CWC15Q9P013 229 aaKnown RBP23.25■■□□□ 1.31
SNF8-209ENST00000510558 LUC7L2Q9Y383 392 aaKnown RBP23.25■■□□□ 1.31
SNF8-209ENST00000510558 A0A087X0T9 212 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 FPGTO14772 594 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 RFPL3O75679 317 aa23.24■■□□□ 1.31
SNF8-209ENST00000510558 PIGNO95427 931 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms