RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CBX6O95503 412 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 FURINP09958 794 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 TACR2P21452 398 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 GJB2P29033 226 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 CSTF2P33240 577 aaKnown RBP eCLIP10.96□□□□□ -0.65
SNF8-207ENST00000509995 STAT5AP42229 794 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 PIK3CAP42336 1068 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 PGDP52209 483 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 LIMK2P53671 638 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 DAOAP59103 153 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 SNRPFP62306 86 aaKnown RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 IRX6P78412 446 aaPredicted RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 CENPCQ03188 943 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 ALG11Q2TAA5 492 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 ARSIQ5FYB1 569 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 RAP1GAP2Q684P5 730 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 ARHGAP17Q68EM7 881 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 OGFOD3Q6PK18 319 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 EPM2AIP1Q7L775 607 aaPredicted RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 CHSY1Q86X52 802 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 APLFQ8IW19 511 aaPredicted RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 TSACCQ96A04 125 aaPredicted RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 FEM1AQ9BSK4 669 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 MFRPQ9BY79 579 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 APOBEC3GQ9HC16 384 aaKnown RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 CNGB3Q9NQW8 809 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 OCIAD1Q9NX40 245 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 LUZP4Q9P127 313 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 CCDC39Q9UFE4 941 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 IL36AQ9UHA7 158 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 TLR6Q9Y2C9 796 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 TMEM184BQ9Y519 407 aaPredicted RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 B4DGG1 531 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 PRSS44E7EML9 344 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 TOR1BO14657 336 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 TSPAN6O43657 245 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 EXOC3O60645 756 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 LEFTY1O75610 366 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 RASGRP1O95267 797 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 MT-CO1P00395 513 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 HLA-DRAP01903 254 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 F8A1P23610 371 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 NEK4P51957 841 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 OR1D5P58170 312 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 NUCB2P80303 420 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 NNTQ13423 1086 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 ERV3-1Q14264 604 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 RRAGBQ5VZM2 374 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 JMJD6Q6NYC1 403 aaPredicted RBP10.95□□□□□ -0.66
SNF8-207ENST00000509995 TMEM135Q86UB9 458 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 VPS36Q86VN1 386 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 C12orf56Q8IXR9 622 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 SCML4Q8N228 414 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 BMPERQ8N8U9 685 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 OR52K2Q8NGK3 314 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 ZNF507Q8TCN5 953 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 SLC39A13Q96H72 371 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 SERPINB11Q96P15 392 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 PPP1R9BQ96SB3 815 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.661e-7■■■□□ 16.3
SNF8-207ENST00000509995 TRIM55Q9BYV6 548 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 IMPG2Q9BZV3 1241 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 NIF3L1Q9GZT8 377 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 TRIT1Q9H3H1 467 aaKnown RBP10.95□□□□□ -0.66
SNF8-207ENST00000509995 SLAMF7Q9NQ25 335 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 RCOR3Q9P2K3 495 aaPredicted RBP10.95□□□□□ -0.66
SNF8-207ENST00000509995 VPS28Q9UK41 221 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 OR51B4Q9Y5P0 310 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 WASF2Q9Y6W5 498 aa10.95□□□□□ -0.66
SNF8-207ENST00000509995 ANKUB1A6NFN9 424 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 F5H5T6 163 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 K7ERQ8 282 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 EIF5BO60841 1220 aaKnown RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 STK17BO94768 372 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 THRAP10827 490 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 PTGER4P35408 488 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 DLG4P78352 724 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 ZRSR2Q15696 482 aaKnown RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 GOLGA7BQ2TAP0 167 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 TTC39BQ5VTQ0 682 aaPredicted RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 PARS2Q7L3T8 475 aaKnown RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 RD3Q7Z3Z2 195 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 ATP11CQ8NB49 1132 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 SLC4A11Q8NBS3 891 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 FAM46DQ8NEK8 389 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 OR4D9Q8NGE8 314 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 DQX1Q8TE96 717 aaKnown RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 MRPL40Q9NQ50 206 aaKnown RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 TFIP11Q9UBB9 837 aaKnown RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 ITM2BQ9Y287 266 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 PCDHGA9Q9Y5G4 932 aaKnown RBP10.94□□□□□ -0.66
SNF8-207ENST00000509995 RPS6KL1Q9Y6S9 549 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 ANKRD36A6QL64 1941 aa10.94□□□□□ -0.66
SNF8-207ENST00000509995 NEMP1O14524 444 aa10.93□□□□□ -0.66
SNF8-207ENST00000509995 INPP4BO15327 924 aa10.93□□□□□ -0.66
SNF8-207ENST00000509995 SMAD6O43541 496 aaKnown RBP10.93□□□□□ -0.66
SNF8-207ENST00000509995 LRCH4O75427 683 aa10.93□□□□□ -0.66
SNF8-207ENST00000509995 DLGAP3O95886 979 aa10.93□□□□□ -0.66
SNF8-207ENST00000509995 BMP15O95972 392 aa10.93□□□□□ -0.66
SNF8-207ENST00000509995 APOEP02649 317 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms