RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	BUB1B	O60566	1050 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	CNTN5	O94779	1100 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	ALDH1A2	O94788	518 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	PTMA	P06454	111 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	KRT10	P13645	584 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	NNMT	P40261	264 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	SSR1	P43307	286 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	NDST2	P52849	883 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	NAP1L1	P55209	391 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	TPI1	P60174	286 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	CCZ1B	P86790	482 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	CCZ1	P86791	482 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	RPL6	Q02878	288 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	KDSR	Q06136	332 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	CCDC173	Q0VFZ6	552 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	MESP2	Q0VG99	397 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	GRIK2	Q13002	908 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	GEN1	Q17RS7	908 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	PLEKHG6	Q3KR16	790 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	ALF	Q53S48	1182 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	FSCB	Q5H9T9	825 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	MBLAC2	Q68D91	279 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	CXorf57	Q6NSI4	855 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	RFX8	Q6ZV50	586 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	LRRC49	Q8IUZ0	686 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	SLC41A1	Q8IVJ1	513 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	UMODL1-AS1	Q8N2C9	162 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	RTL3	Q8N8U3	475 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	IL17RC	Q8NAC3	791 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	KCTD6	Q8NC69	237 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	ACRBP	Q8NEB7	543 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	KIAA1524	Q8TCG1	905 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	NXPE2	Q96DL1	559 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	ALG14	Q96F25	216 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	PEBP4	Q96S96	227 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	TRIM4	Q9C037	500 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	MPP6	Q9NZW5	540 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	ANKMY1	Q9P2S6	941 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	SUN2	Q9UH99	717 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	OR51B4	Q9Y5P0	310 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	UTP20	O75691	2785 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	BOD1L1	Q8NFC6	3051 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	PSTPIP1	O43586	416 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	SPOP	O43791	374 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	RHOC	P08134	193 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	GP1BB	P13224	206 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	COMT	P21964	271 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	CD70	P32970	193 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	ARSE	P51690	589 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	GEMIN4	P57678	1058 aa	Known RBP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	ST8SIA6	P61647	398 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	ECT2L	Q008S8	904 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	RHD	Q02161	417 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	GNA12	Q03113	381 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	KRT81	Q14533	505 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	AGER	Q15109	404 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	PARP15	Q460N3	678 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	ODF2	Q5BJF6	829 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	PITRM1	Q5JRX3	1037 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	KCNT1	Q5JUK3	1230 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	RNF219	Q5W0B1	726 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	TMEM215	Q68D42	235 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	DAAM2	Q86T65	1068 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	PYROXD2	Q8N2H3	581 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	WFDC5	Q8TCV5	224 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	HMGB4	Q8WW32	186 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	TSC1	Q92574	1164 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	HSPH1	Q92598	858 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	KCTD15	Q96SI1	283 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	GABRG3	Q99928	467 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZNF670	Q9BS34	389 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	CIPC	Q9C0C6	399 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	MUC3B	Q9H195	1237 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	FBRS	Q9HAH7	460 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	IL21R	Q9HBE5	538 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	CWC15	Q9P013	229 aa	Known RBP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	VPS28	Q9UK41	221 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	INTS6	Q9UL03	887 aa	Known RBP	10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	HPCAL4	Q9UM19	191 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	NEU3	Q9UQ49	428 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	SNX10	Q9Y5X0	201 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	DUSP10	Q9Y6W6	482 aa		10.48	□□□□□ -0.73
PTPN20-222	ENST00000509774	TARSL2	A2RTX5	802 aa	Known RBP	10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	CCDC66	A2RUB6	948 aa		10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	FAM181B	A6NEQ2	426 aa		10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	MIF4GD	A9UHW6	222 aa	Known RBP	10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	SGK1	O00141	431 aa		10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZSCAN12	O43309	604 aa		10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	RAMP2	O60895	175 aa		10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	F12	P00748	615 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZFX	P17010	805 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	GOT1	P17174	413 aa		10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	ERCC2	P18074	760 aa		10.47	□□□□□ -0.73
PTPN20-222	ENST00000509774	KDELR1	P24390	212 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms