RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CKMT1AP12532 417 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 TNFAIP3P21580 790 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 XPAP23025 273 aaPredicted RBP15.61■□□□□ 0.09
TPM3-219ENST00000509409 ZNF143P52747 638 aaPredicted RBP15.61■□□□□ 0.09
TPM3-219ENST00000509409 RHOAP61586 193 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 PDE1CQ14123 709 aaPredicted RBP15.61■□□□□ 0.09
TPM3-219ENST00000509409 FZD2Q14332 565 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 MON1BQ7L1V2 547 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 CACTIN-AS1Q8N1I8 211 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 RTL3Q8N8U3 475 aaKnown RBP15.61■□□□□ 0.09
TPM3-219ENST00000509409 NETO2Q8NC67 525 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 CXorf40AQ8TE69 158 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 ARHGEF26Q96DR7 871 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 APOLD1Q96LR9 279 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 GDAP1L1Q96MZ0 367 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 MCEEQ96PE7 176 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 ERGIC2Q96RQ1 377 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 EPAS1Q99814 870 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 CATSPERBQ9H7T0 1116 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 GGT7Q9UJ14 662 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 FZD10Q9ULW2 581 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 NYNRINQ9P2P1 1898 aaKnown RBP15.61■□□□□ 0.09
TPM3-219ENST00000509409 SPTY2D1-AS1A0A0U1RR47 76 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 LRRC10BA6NIK2 292 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 EIF4E1BA6NMX2 242 aaKnown RBP15.6■□□□□ 0.09
TPM3-219ENST00000509409 RASA4BC9J798 803 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 K7ESM1 405 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 RASA4O43374 803 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 MMP20O60882 483 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 IGSF6O95976 241 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 CSF2P04141 144 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 FERP16591 822 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 JUNDP17535 347 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 ABCG1P45844 678 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 YBEYP58557 167 aaPredicted RBP15.6■□□□□ 0.09
TPM3-219ENST00000509409 RPL7AP62424 266 aaKnown RBP15.6■□□□□ 0.09
TPM3-219ENST00000509409 RTP5Q14D33 572 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 LRRC73Q5JTD7 316 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 ACAD10Q6JQN1 1059 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 VPS36Q86VN1 386 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 PARGQ86W56 976 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 LMX1AQ8TE12 382 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 CASKIN2Q8WXE0 1202 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 ASB12Q8WXK4 309 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 RFFLQ8WZ73 363 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 HMCESQ96FZ2 354 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 NCAPGQ9BPX3 1015 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 CNPY3Q9BT09 278 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 TTYH3Q9C0H2 523 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 KLC2Q9H0B6 622 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 NEU3Q9UQ49 428 aa15.6■□□□□ 0.09
TPM3-219ENST00000509409 DOCK9Q9BZ29 2069 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 ADAMTS20P59510 1910 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 TMCO5BA8MYB1 307 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 AQP9O43315 295 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 TLX3O43711 291 aaPredicted RBP15.59■□□□□ 0.09
TPM3-219ENST00000509409 OPA1O60313 960 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 TM7SF2O76062 418 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 GIMD1P0DJR0 217 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 THOP1P52888 689 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 PTK2BQ14289 1009 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 SOWAHCQ53LP3 525 aaPredicted RBP15.59■□□□□ 0.09
TPM3-219ENST00000509409 INO80DQ53TQ3 878 aaPredicted RBP15.59■□□□□ 0.09
TPM3-219ENST00000509409 MCOLN2Q8IZK6 566 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 DCBLD1Q8N8Z6 715 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 DENND6BQ8NEG7 585 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 ZNF548Q8NEK5 533 aaPredicted RBP15.59■□□□□ 0.09
TPM3-219ENST00000509409 BAP1Q92560 729 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 KLF6Q99612 283 aaPredicted RBP15.59■□□□□ 0.09
TPM3-219ENST00000509409 C1QTNF7Q9BXJ2 289 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 NOL6Q9H6R4 1146 aaKnown RBP15.59■□□□□ 0.09
TPM3-219ENST00000509409 USP29Q9HBJ7 922 aa15.59■□□□□ 0.09
TPM3-219ENST00000509409 CPED1A4D0V7 1026 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 BRINP1O60477 761 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 NME1P15531 152 aaKnown RBP15.58■□□□□ 0.08
TPM3-219ENST00000509409 TIMP2P16035 220 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 ITIH2P19823 946 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 ITPKBP27987 946 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 ACTN2P35609 894 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 EIF2S3P41091 472 aaKnown RBP15.58■□□□□ 0.08
TPM3-219ENST00000509409 AIF1P55008 147 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 TPI1P60174 286 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 SERINC3Q13530 473 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 DEFB133Q30KQ1 61 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 PARP15Q460N3 678 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 CCDC183Q5T5S1 534 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 AOPEPQ8N6M6 819 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 FAM181AQ8N9Y4 354 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 IFI44Q8TCB0 444 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 MAPK15Q8TD08 544 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 BTN2A2Q8WVV5 523 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 FGF11Q92914 225 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 CRELD1Q96HD1 420 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 DEPDC7Q96QD5 511 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 IL12RB2Q99665 862 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 WRAP53Q9BUR4 548 aaKnown RBP15.58■□□□□ 0.08
TPM3-219ENST00000509409 GPR27Q9NS67 375 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 DONSONQ9NYP3 566 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 SPASTQ9UBP0 616 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 UBA2Q9UBT2 640 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms