RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 OR4C6Q8NH72 309 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 FGF11Q92914 225 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 TBC1D31Q96DN5 1066 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 HMCESQ96FZ2 354 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 BPIFA3Q9BQP9 254 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 HDAC8Q9BY41 377 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 ZDHHC6Q9H6R6 413 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 BPTFQ12830 3046 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 ARHGEF17Q96PE2 2063 aaPredicted RBP11.08□□□□□ -0.63
RNF4-212ENST00000509258 A0A1B0GTH6 734 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 NEMP2A6NFY4 417 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 GOLGA6L22H0YM25 854 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 DDX3XO00571 662 aaKnown RBP eCLIP11.08□□□□□ -0.642e-8■■■□□ 17.9
RNF4-212ENST00000509258 TRIM38O00635 465 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 THEGLP0DJG4 465 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 GIMD1P0DJR0 217 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 ADRB3P13945 408 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 HNRNPA2B1P22626 353 aaKnown RBP11.08□□□□□ -0.64
RNF4-212ENST00000509258 L1CAMP32004 1257 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 ETFBP38117 255 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 MAPKAPK2P49137 400 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 SLC20A2Q08357 652 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 MAMLD1Q13495 774 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 TBC1D25Q3MII6 688 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 SCYL2Q6P3W7 929 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 SLFN11Q7Z7L1 901 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 HORMAD1Q86X24 394 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 DCP2Q8IU60 420 aaKnown RBP11.08□□□□□ -0.64
RNF4-212ENST00000509258 TP53INP2Q8IXH6 220 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 PCDH20Q8N6Y1 951 aaKnown RBP11.08□□□□□ -0.64
RNF4-212ENST00000509258 RTL3Q8N8U3 475 aaKnown RBP11.08□□□□□ -0.64
RNF4-212ENST00000509258 LSM14AQ8ND56 463 aaKnown RBP11.08□□□□□ -0.64
RNF4-212ENST00000509258 ANKRD20A12PQ8NF67 263 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 OR13H1Q8NG92 308 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 NSMCE3Q96MG7 304 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 KLF6Q99612 283 aaPredicted RBP11.08□□□□□ -0.64
RNF4-212ENST00000509258 HEPHQ9BQS7 1158 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 CEP44Q9C0F1 390 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 HAUS4Q9H6D7 363 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 KLHL11Q9NVR0 708 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 UCKL1Q9NWZ5 548 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 LHX3Q9UBR4 397 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 FADS3Q9Y5Q0 445 aa11.08□□□□□ -0.64
RNF4-212ENST00000509258 SETXQ7Z333 2677 aaKnown RBP11.07□□□□□ -0.64
RNF4-212ENST00000509258 TEX51A0A1B0GUA7 166 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 POM121BA6NF01 834 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 H3BM21 787 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
RNF4-212ENST00000509258 FFAR2O15552 330 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 KDELR3O43731 214 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 CREB3O43889 395 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 RAMP2O60895 175 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 TMCC1O94876 653 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 PCDH8O95206 1070 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 MYF5P13349 255 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 TCF4P15884 667 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 DGKAP23743 735 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 ITGB7P26010 798 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 DUSP3P51452 185 aaPredicted RBP11.07□□□□□ -0.64
RNF4-212ENST00000509258 NEK3P51956 506 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 GEMIN4P57678 1058 aaKnown RBP11.07□□□□□ -0.64
RNF4-212ENST00000509258 TLE3Q04726 772 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 NR1I3Q14994 352 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 POLD3Q15054 466 aaPredicted RBP11.07□□□□□ -0.64
RNF4-212ENST00000509258 ARL13BQ3SXY8 428 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 ZNF542PQ5EBM4 170 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 PLEKHA7Q6IQ23 1121 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 NYAP1Q6ZVC0 841 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 GPR155Q7Z3F1 870 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 TMC6Q7Z403 805 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 SLC25A45Q8N413 288 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 IFT43Q96FT9 208 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 EXOC2Q96KP1 924 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 BMFQ96LC9 184 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 KCTD15Q96SI1 283 aaPredicted RBP11.07□□□□□ -0.64
RNF4-212ENST00000509258 CNPY3Q9BT09 278 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 DUSP23Q9BVJ7 150 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 CALN1Q9BXU9 219 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 MAGEH1Q9H213 219 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 PDFQ9HBH1 243 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 GPR27Q9NS67 375 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 PNMA8BQ9ULN7 279 aaPredicted RBP11.07□□□□□ -0.64
RNF4-212ENST00000509258 MFHAS1Q9Y4C4 1052 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 CFAP46Q8IYW2 2715 aa11.07□□□□□ -0.64
RNF4-212ENST00000509258 ZNF462Q96JM2 2506 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 SYCE3A1L190 88 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 C16orf96A6NNT2 1141 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 A6NNZ2 444 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 RASA4BC9J798 803 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 J3KR12 359 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 KRIT1O00522 736 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 RASA4O43374 803 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 PIAS2O75928 621 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 C1QL1O75973 258 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 MT-CO3P00414 261 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 PRB1P04280 392 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 UGT2B4P06133 528 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 GP1BAP07359 652 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 CKMT1AP12532 417 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms