RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
DDR1-262ENST00000508312 ADI1Q9BV57 179 aa12.85□□□□□ -0.35
DDR1-262ENST00000508312 SMARCAD1Q9H4L7 1026 aa12.85□□□□□ -0.35
DDR1-262ENST00000508312 SOX17Q9H6I2 414 aaPredicted RBP12.85□□□□□ -0.35
DDR1-262ENST00000508312 NOL6Q9H6R4 1146 aaKnown RBP12.85□□□□□ -0.35
DDR1-262ENST00000508312 CDHR5Q9HBB8 845 aa12.85□□□□□ -0.35
DDR1-262ENST00000508312 SEPT3Q9UH03 358 aa12.85□□□□□ -0.35
DDR1-262ENST00000508312 CNOT6Q9ULM6 557 aaKnown RBP12.85□□□□□ -0.35
DDR1-262ENST00000508312 CNTN6Q9UQ52 1028 aa12.85□□□□□ -0.35
DDR1-262ENST00000508312 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
DDR1-262ENST00000508312 LCTP09848 1927 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 CCDC162PA2VCL2 907 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 FAM159BA6NKW6 160 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 KCNU1A8MYU2 1149 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 ZNF701M0R085 212 aaPredicted RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 DYNC1LI2O43237 492 aaPredicted RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 C8BP07358 591 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 GRIA3P42263 894 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 HARS2P49590 506 aaKnown RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 EFNA5P52803 228 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 PSME3P61289 254 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 GBE1Q04446 702 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 PRAMEF19Q5SWL8 479 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 PPP1R26Q5T8A7 1209 aaPredicted RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 PYROXD2Q8N2H3 581 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 SNX31Q8N9S9 440 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 ZNF420Q8TAQ5 688 aaPredicted RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 FAM110BQ8TC76 370 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 EBNA1BP2Q99848 306 aaKnown RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 ILKAPQ9H0C8 392 aaPredicted RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 POLE4Q9NR33 117 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 ERVK-11Q9UQG0 969 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 NME7Q9Y5B8 376 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 NOTOA8MTQ0 251 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 E7ENX8 843 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 SNAP91O60641 907 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 LCP1P13796 627 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 MZF1P28698 734 aaPredicted RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 SOX11P35716 441 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 OPRL1P41146 370 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 PRKCQQ04759 706 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 TRIM25Q14258 630 aaKnown RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 PITRM1Q5JRX3 1037 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 NAT16Q8N8M0 369 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 PBXIP1Q96AQ6 731 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 TMEM176AQ96HP8 235 aa12.84□□□□□ -0.35
DDR1-262ENST00000508312 FRMD8P1Q9BZ68 369 aaPredicted RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 DUS2Q9NX74 493 aaKnown RBP12.84□□□□□ -0.35
DDR1-262ENST00000508312 USP12O75317 370 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 CLPXO76031 633 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 TRUB2O95900 331 aaKnown RBP12.83□□□□□ -0.36
DDR1-262ENST00000508312 GLDCP23378 1020 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 DCKP27707 260 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 IDUAP35475 653 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 GOLGA7BQ2TAP0 167 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 ANO4Q32M45 955 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 DSG4Q86SJ6 1040 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 TP53INP2Q8IXH6 220 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 CLIP4Q8N3C7 705 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 TFAP2CQ92754 450 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 CNDP1Q96KN2 507 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 ALPK1Q96QP1 1244 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 UNKQ9C0B0 810 aaKnown RBP12.83□□□□□ -0.36
DDR1-262ENST00000508312 MRPL46Q9H2W6 279 aaKnown RBP12.83□□□□□ -0.36
DDR1-262ENST00000508312 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 GJD2Q9UKL4 321 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 A0A1W2PQ67 120 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 TMEM114B3SHH9 223 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 MGAMO43451 1857 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 METTL18O95568 372 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 MATN1P21941 496 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 GPD2P43304 727 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 MLLT10P55197 1068 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 RHDQ02161 417 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
DDR1-262ENST00000508312 PIWIL3Q7Z3Z3 882 aaKnown RBP12.83□□□□□ -0.36
DDR1-262ENST00000508312 ASB9Q96DX5 294 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 SPATA17Q96L03 361 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
DDR1-262ENST00000508312 PDZD7Q9H5P4 517 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 FANCEQ9HB96 536 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 SETD4Q9NVD3 440 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 RIC8BQ9NVN3 520 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 SNTG2Q9NY99 539 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 PCDHGA3Q9Y5H0 932 aa12.83□□□□□ -0.36
DDR1-262ENST00000508312 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
DDR1-262ENST00000508312 HDCP19113 662 aa12.82□□□□□ -0.36
DDR1-262ENST00000508312 EDNRBP24530 442 aa12.82□□□□□ -0.36
DDR1-262ENST00000508312 TTKP33981 857 aa12.82□□□□□ -0.36
DDR1-262ENST00000508312 HPCAL1P37235 193 aa12.82□□□□□ -0.36
DDR1-262ENST00000508312 NR4A2P43354 598 aa12.82□□□□□ -0.36
DDR1-262ENST00000508312 NME5P56597 212 aa12.82□□□□□ -0.36
DDR1-262ENST00000508312 PITX1P78337 314 aaPredicted RBP12.82□□□□□ -0.36
DDR1-262ENST00000508312 NOMO1Q15155 1222 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms