RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 KRBA2Q6ZNG9 492 aa4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 ZNF771Q7L3S4 317 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 FTSJ3Q8IY81 847 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 HDAC2Q92769 488 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 IFT27Q9BW83 186 aa4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 SAYSD1Q9NPB0 183 aa4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 PDP2Q9P2J9 529 aa4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 IL36RNQ9UBH0 155 aa4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 DAPP1Q9UN19 280 aa4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 RAP2CQ9Y3L5 183 aa4.5□□□□□ -1.69
TRAPPC13-209ENST00000508304 A0A1B0GVC2 190 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 ERI2A8K979 691 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 GRM8O00222 908 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 ASAP2O43150 1006 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 LDB2O43679 373 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 KIF1CO43896 1103 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 IFIT1P09914 478 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 DAOP14920 347 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 PRPH2P23942 346 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 CDK18Q07002 472 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 ZNF284Q2VY69 593 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 JMJD6Q6NYC1 403 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 C4orf50Q6ZRC1 276 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 PALB2Q86YC2 1186 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 C2CD5Q86YS7 1000 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 VPS52Q8N1B4 723 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 ESX1Q8N693 406 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 TMEM217Q8N7C4 229 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 LRRC57Q8N9N7 239 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 NEXN-AS1Q8NBZ9 246 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 CMASQ8NFW8 434 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 LILRB1Q8NHL6 650 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 AFG1LQ8WV93 481 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 KCNJ9Q92806 393 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 TRAPPC9Q96Q05 1148 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 C1QTNF5Q9BXJ0 243 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 HIPK3Q9H422 1215 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 RIC8AQ9NPQ8 531 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 PRDM8Q9NQV8 689 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 SLC13A4Q9UKG4 626 aa4.49□□□□□ -1.69
TRAPPC13-209ENST00000508304 ITIH6Q6UXX5 1313 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 IGLV5-52A0A0A0MRZ9 124 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 IPO5O00410 1097 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 TMCC1O94876 653 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 HEXIM1O94992 359 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 KRTAP10-3P60369 221 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 ACSM2AQ08AH3 577 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 TRPC3Q13507 836 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 KCTD2Q14681 263 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 FBXO47Q5MNV8 452 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 DGAT2L7PQ6IED9 249 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 FAM180BQ6P0A1 224 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 SMIM29Q86T20 159 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 DCUN1D3Q8IWE4 304 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 SUGP1Q8IWZ8 645 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 FSIP1Q8NA03 581 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 SLC2A12Q8TD20 617 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 ARRDC3Q96B67 414 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 HDHD5Q9BXW7 423 aa4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 CADM1Q9BY67 442 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 FRMD8Q9BZ67 464 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 TAF1DQ9H5J8 278 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-209ENST00000508304 SNED1Q8TER0 1413 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 SYN3O14994 580 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 SEPT4O43236 478 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 RNASEH2AO75792 299 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 VEGFAP15692 232 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 GM2AP17900 193 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 AVPR1AP37288 418 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 SKIV2L2P42285 1042 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 PPP3CCP48454 512 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 AARSP49588 968 aaKnown RBP eCLIP4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 RPS6KA3P51812 740 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 GALNTL6Q49A17 601 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 GXYLT1Q4G148 440 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 TTC22Q5TAA0 569 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 TMEM268Q5VZI3 342 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 HEPHL1Q6MZM0 1159 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 KIAA1324Q6UXG2 1013 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 MOGAT3Q86VF5 341 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 OR1N1Q8NGS0 311 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 SCAMP5Q8TAC9 235 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 UBE2Q2Q8WVN8 375 aa4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 MAELQ96JY0 434 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-209ENST00000508304 C17orf102A2RUQ5 167 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 LINC01553A4QN01 128 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 A6NLC8 198 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 EYA2O00167 538 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 TIMM44O43615 452 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 MYZAPP0CAP1 466 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 CYP4B1P13584 511 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 RXRAP19793 462 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 PRKCHP24723 683 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 THPOP40225 353 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 VEGFCP49767 419 aa4.46□□□□□ -1.7
TRAPPC13-209ENST00000508304 CLCNKBP51801 687 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms