RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TMA16Q96EY4 203 aaKnown RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 BICD1Q96G01 975 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 SMARCD1Q96GM5 515 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 HPDLQ96IR7 371 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RBM15Q96T37 977 aaKnown RBP eCLIP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 ZPBPQ9BS86 351 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 PLA2G12AQ9BZM1 189 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 SLC13A1Q9BZW2 595 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MTMR12Q9C0I1 747 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RWDD1Q9H446 243 aaPredicted RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 NPDC1Q9NQX5 325 aaPredicted RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 ACSS2Q9NR19 701 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 KRT82Q9NSB4 513 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 DDX19AQ9NUU7 478 aaKnown RBP3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CLIC5Q9NZA1 410 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MARCH2Q9P0N8 246 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 C5AR2Q9P296 337 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 ZNHIT2Q9UHR6 403 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 RASAL2Q9UJF2 1139 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 KIAA1024Q9UPX6 916 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 MAPK8IP1Q9UQF2 711 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 USP3Q9Y6I4 520 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 CR1P17927 2039 aa3.41□□□□□ -1.86
TCOF1-208ENST00000506063 DOCK4Q8N1I0 1966 aa3.4□□□□□ -1.86
TCOF1-208ENST00000506063 IGHV1OR21-1A0A087WYE8 117 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 NPHP3-ACAD11A0A0J9YXS1 232 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 GOLGA6L7A0A1B0GV03 622 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 A0A1W2PQJ5 194 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 F5H423 210 aaPredicted RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 CCL21O00585 134 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF185O15231 689 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ALOX15BO15296 676 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ATP9BO43861 1147 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 TBL1XO60907 577 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 GABBR2O75899 941 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 DEXIO95424 95 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 CLDN14O95500 239 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 IGLV3-27P01718 113 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ALPIP09923 528 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 FAM163BP0C2L3 166 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 CCDC130P13994 396 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 LPOP22079 712 aaPredicted RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 EIF4A3P38919 411 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 STAT1P42224 750 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 GLRBP48167 497 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 NUMBP49757 651 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 KIF11P52732 1056 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 NDST2P52849 883 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 MAP3K7CLP57077 242 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF445P59923 1031 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 RPS24P62847 133 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 RPS21P63220 83 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 OTUD4Q01804 1114 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 AKAP17AQ02040 695 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PPARDQ03181 441 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 KRTAP1-1Q07627 177 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 HDAC1Q13547 482 aaPredicted RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 RAPSNQ13702 412 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PCOLCEQ15113 449 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ELOCQ15369 112 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 TSGA10IPQ3SY00 556 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 FAM26FQ5R3K3 315 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 FAXCQ5TGI0 409 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 VWA5B1Q5TIE3 1220 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 FAM46CQ5VWP2 391 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 SPECC1LQ69YQ0 1117 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ADALQ6DHV7 355 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 KIAA1161Q6NSJ0 714 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 C6orf15Q6UXA7 325 aaPredicted RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 CLEC20AQ6ZU45 233 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 Q6ZVU0 165 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 CCDC186Q7Z3E2 898 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 MFN1Q8IWA4 741 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 SMC5Q8IY18 1101 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 FBXL16Q8N461 479 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 DENND6BQ8NEG7 585 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 CCL4L1Q8NHW4 92 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ADAMTS18Q8TE60 1221 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ASB12Q8WXK4 309 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 OR8D1Q8WZ84 308 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 TSACCQ96A04 125 aaPredicted RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PLD4Q96BZ4 506 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 ALG14Q96F25 216 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PDXPQ96GD0 296 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 SCARF2Q96GP6 870 aaPredicted RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 MMTAG2Q9BU76 263 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 BRD8Q9H0E9 1235 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 SDCBP2Q9H190 292 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 AGPAT4Q9NRZ5 378 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 NDFIP2Q9NV92 336 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 GPR83Q9NYM4 423 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 STK17AQ9UEE5 414 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 TRPS1Q9UHF7 1281 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 IPO11Q9UI26 975 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 NAGPAQ9UK23 515 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 AGO2Q9UKV8 859 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 NOVA2Q9UNW9 492 aaKnown RBP3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PLEKHA6Q9Y2H5 1048 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PLEKHM1Q9Y4G2 1056 aa3.4□□□□□ -1.87
TCOF1-208ENST00000506063 PCDHB13Q9Y5F0 798 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms