RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ATP11CQ8NB49 1132 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 CCDC112Q8NEF3 446 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 DQX1Q8TE96 717 aaKnown RBP12.74□□□□□ -0.37
LSM6-204ENST00000504181 CLEC4CQ8WTT0 213 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 SLC39A13Q96H72 371 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 ZSCAN31Q96LW9 406 aaPredicted RBP12.74□□□□□ -0.37
LSM6-204ENST00000504181 FEM1AQ9BSK4 669 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 BACH2Q9BYV9 841 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 TNKS2Q9H2K2 1166 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 CYP4F12Q9HCS2 524 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 ITM2BQ9Y287 266 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 TCAF2A6NFQ2 919 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 SMAD6O43541 496 aaKnown RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 SORBS2O94875 1100 aaKnown RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 APOEP02649 317 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 PDCP20941 246 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 MAP4P27816 1152 aaKnown RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 RGS7P49802 495 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 YPEL5P62699 121 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 INPP5JQ15735 1006 aaPredicted RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 ZXDCQ2QGD7 858 aaPredicted RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 ALG11Q2TAA5 492 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 ANKS6Q68DC2 871 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 PARS2Q7L3T8 475 aaKnown RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 KDELC2Q7Z4H8 507 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 TAS1R2Q8TE23 839 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 SLC29A3Q9BZD2 475 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 ASPSCR1Q9BZE9 553 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 CISHQ9NSE2 258 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 OCIAD1Q9NX40 245 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 CGNQ9P2M7 1197 aaKnown RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 HESX1Q9UBX0 185 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 HS3ST2Q9Y278 367 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 SLC5A6Q9Y289 635 aa12.73□□□□□ -0.37
LSM6-204ENST00000504181 ANKHD1Q8IWZ3 2542 aaKnown RBP12.73□□□□□ -0.37
LSM6-204ENST00000504181 B4DGG1 531 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 NEMP1O14524 444 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 B4GAT1O43505 415 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 AP1G1O43747 822 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 ENDOD1O94919 500 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 RASGRP1O95267 797 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 FURINP09958 794 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 L1CAMP32004 1257 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 OR1D5P58170 312 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 CENPCQ03188 943 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 C14orf28Q4W4Y0 310 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 C1orf220Q5T0J3 134 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 DCAF12Q5T6F0 453 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 DPY19L3Q6ZPD9 716 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 SCML4Q8N228 414 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 PDILTQ8N807 584 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 KCTD13Q8WZ19 329 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 CENPTQ96BT3 561 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
LSM6-204ENST00000504181 ENTPD4Q9Y227 616 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 OR51B4Q9Y5P0 310 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 OAS3Q9Y6K5 1087 aaKnown RBP12.72□□□□□ -0.37
LSM6-204ENST00000504181 WASF2Q9Y6W5 498 aa12.72□□□□□ -0.37
LSM6-204ENST00000504181 ABCA2Q9BZC7 2435 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 MDC1Q14676 2089 aaKnown RBP12.71□□□□□ -0.37
LSM6-204ENST00000504181 SNAP91O60641 907 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 EIF5BO60841 1220 aaKnown RBP12.71□□□□□ -0.37
LSM6-204ENST00000504181 DNAJB5O75953 348 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 ALDH4A1P30038 563 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 CSTF2P33240 577 aaKnown RBP eCLIP12.71□□□□□ -0.37
LSM6-204ENST00000504181 ABL2P42684 1182 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 IRAK1P51617 712 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 ABHD18Q0P651 414 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 NNTQ13423 1086 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 ERV3-1Q14264 604 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 HLTFQ14527 1009 aaKnown RBP eCLIP12.71□□□□□ -0.37
LSM6-204ENST00000504181 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.37
LSM6-204ENST00000504181 EDRF1Q3B7T1 1238 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 CRTC2Q53ET0 693 aaPredicted RBP12.71□□□□□ -0.37
LSM6-204ENST00000504181 ZC3H12AQ5D1E8 599 aaKnown RBP12.71□□□□□ -0.37
LSM6-204ENST00000504181 RABGAP1LQ5R372 815 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.37
LSM6-204ENST00000504181 C22orf39Q6P5X5 142 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 ENPP7Q6UWV6 458 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 TAC4Q86UU9 113 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 AGBL5Q8NDL9 886 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 FAM46DQ8NEK8 389 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 ASB12Q8WXK4 309 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 IRGQQ8WZA9 623 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 BTN2A3PQ96KV6 586 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.71□□□□□ -0.37
LSM6-204ENST00000504181 LUZP4Q9P127 313 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 PCDHB3Q9Y5E6 796 aa12.71□□□□□ -0.37
LSM6-204ENST00000504181 IKBKBO14920 756 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 TSPAN6O43657 245 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms