RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 TJP2Q9UDY2 1190 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 PLEKHB1Q9UF11 243 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 SUN2Q9UH99 717 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 GGT7Q9UJ14 662 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 PNMA8BQ9ULN7 279 aaPredicted RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 ZFR2Q9UPR6 939 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 ZNF510Q9Y2H8 683 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 LOXL2Q9Y4K0 774 aa3.73□□□□□ -1.81
USP46-205ENST00000504078 ZNF106Q9H2Y7 1883 aaKnown RBP3.73□□□□□ -1.81
USP46-205ENST00000504078 TYW5A2RUC4 315 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 A6NNZ2 444 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 D6RAR5 112 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 C1QTNF3-AMACRE9PGA6 284 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PRAMEF26H0Y7S4 382 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 K7ERQ8 282 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PDE2AO00408 941 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 KPNA3O00505 521 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 PLD2O14939 933 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 KIAA0391O15091 583 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 EIF3DO15371 548 aaKnown RBP eCLIP3.72□□□□□ -1.81
USP46-205ENST00000504078 AQP9O43315 295 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SLC26A4O43511 780 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ACSL4O60488 711 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SNAP91O60641 907 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 GCATO75600 419 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 AGFG2O95081 481 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PCDH8O95206 1070 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TIAF1O95411 115 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 GJB6O95452 261 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ZBED1O96006 694 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ASS1P00966 412 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 ASLP04424 464 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 RPLP1P05386 114 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 RPLP0P05388 317 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 CTSLP07711 333 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ITGA2BP08514 1039 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 KRT7P08729 469 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 JMJD7P0C870 316 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 LIPCP11150 499 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 P4HA1P13674 534 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 CD19P15391 556 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ZNF18P17022 549 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 HNRNPA2B1P22626 353 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 RRM1P23921 792 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 AKT2P31751 481 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 UGT1A5P35504 534 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 MLLT10P55197 1068 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TBX4P57082 545 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PITX1P78337 314 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 CCL7P80098 99 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ECT2LQ008S8 904 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PDE4CQ08493 712 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 INCA1Q0VD86 236 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 KCNAB2Q13303 367 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PDE1CQ14123 709 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 FZD2Q14332 565 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ELAVL3Q14576 367 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 BMT2Q1RMZ1 405 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ZNF284Q2VY69 593 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ZACNQ401N2 412 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 DCAF6Q58WW2 860 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 C1orf220Q5T0J3 134 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PHF19Q5T6S3 580 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PIP5KL1Q5T9C9 394 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TMCO4Q5TGY1 634 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 BSPRYQ5W0U4 402 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ZCCHC8Q6NZY4 707 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 LINGO4Q6UY18 593 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 Q6ZSR6 202 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 STXBP4Q6ZWJ1 553 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 EPM2AIP1Q7L775 607 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 RAB11FIP2Q7L804 512 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ZNF438Q7Z4V0 828 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 KIAA0907Q7Z7F0 614 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 C14orf80Q86SX3 495 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TAC4Q86UU9 113 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TRIM69Q86WT6 500 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 C1QL4Q86Z23 238 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SRRM1Q8IYB3 904 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 LRRC56Q8IYG6 542 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 SIX6OS1Q8N1H7 587 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 FAM26EQ8N5C1 309 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 Q8N9G6 341 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 CHST14Q8NCH0 376 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 OR52K2Q8NGK3 314 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 OR6K2Q8NGY2 324 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 WDR36Q8NI36 951 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 PCDH19Q8TAB3 1148 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TAS1R2Q8TE23 839 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PARD3BQ8TEW8 1205 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PDCD6IPQ8WUM4 868 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 FBLIM1Q8WUP2 373 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 OR8D1Q8WZ84 308 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 CCDC97Q96F63 343 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 EEF2KMTQ96G04 330 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 CALR3Q96L12 384 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 FCRL2Q96LA5 508 aaPredicted RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 HEXIM2Q96MH2 286 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 CDK5RAP1Q96SZ6 601 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 LRRC61Q9BV99 259 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms