RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TPM4P67936 248 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 KLHL30Q0D2K2 578 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 NR1I3Q14994 352 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 PARP15Q460N3 678 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 ERMARDQ5T6L9 678 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 SEL1L3Q68CR1 1132 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 GDPD4Q6W3E5 623 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 TMC6Q7Z403 805 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 SLC25A45Q8N413 288 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 BAP1Q92560 729 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 KLHL32Q96NJ5 620 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 NAP1L5Q96NT1 182 aaPredicted RBP12.14□□□□□ -0.47
MED28-203ENST00000503945 CALN1Q9BXU9 219 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 TTYH3Q9C0H2 523 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 TAS2R14Q9NYV8 317 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
MED28-203ENST00000503945 ARID1BQ8NFD5 2236 aaPredicted RBP12.14□□□□□ -0.47
MED28-203ENST00000503945 SMG1Q96Q15 3661 aaKnown RBP12.14□□□□□ -0.47
MED28-203ENST00000503945 TMEM191CA6NGB0 347 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 IGLON5A6NGN9 336 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 EIF3CLB5ME19 914 aaKnown RBP12.13□□□□□ -0.47
MED28-203ENST00000503945 FPGTO14772 594 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 FGF10O15520 208 aaPredicted RBP12.13□□□□□ -0.47
MED28-203ENST00000503945 UGT2B4P06133 528 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 GKP32189 559 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 TPI1P60174 286 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 DNAJC3Q13217 504 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
MED28-203ENST00000503945 ILKQ13418 452 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 SERINC3Q13530 473 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 TMEM259Q4ZIN3 620 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 PLEKHA7Q6IQ23 1121 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 UMODL1-AS1Q8N2C9 162 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 OR6K2Q8NGY2 324 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 IFT43Q96FT9 208 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 BMFQ96LC9 184 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 GDAP1L1Q96MZ0 367 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 LENG8Q96PV6 779 aaPredicted RBP12.13□□□□□ -0.47
MED28-203ENST00000503945 EIF3CQ99613 913 aaKnown RBP12.13□□□□□ -0.47
MED28-203ENST00000503945 NCAPGQ9BPX3 1015 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 C1QTNF2Q9BXJ5 285 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 MRPL47Q9HD33 250 aaKnown RBP12.13□□□□□ -0.47
MED28-203ENST00000503945 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 PCSK1NQ9UHG2 260 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 MFHAS1Q9Y4C4 1052 aa12.13□□□□□ -0.47
MED28-203ENST00000503945 BZW2Q9Y6E2 419 aaKnown RBP12.13□□□□□ -0.47
MED28-203ENST00000503945 COL5A1P20908 1838 aaPredicted RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 GCN1Q92616 2671 aaKnown RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 A6NNZ2 444 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 EEF2KO00418 725 aaKnown RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 PRPSAP2O60256 369 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 SDC3O75056 442 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 RFPL3O75679 317 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 TMCC1O94876 653 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 IGSF6O95976 241 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 SKILP12757 684 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 XPAP23025 273 aaPredicted RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 DGKAP23743 735 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 HNF1BP35680 557 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 RABIFP47224 123 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 NDST2P52849 883 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 RHOAP61586 193 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 E2F1Q01094 437 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 OGDHQ02218 1023 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 GRM3Q14832 879 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 ATXN7L2Q5T6C5 722 aaPredicted RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 PARS2Q7L3T8 475 aaKnown RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 ZNF571Q7Z3V5 609 aaPredicted RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 ABI3BPQ7Z7G0 1075 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 OR13H1Q8NG92 308 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 HCAR2Q8TDS4 363 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 ASB12Q8WXK4 309 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 TSC1Q92574 1164 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 HMCESQ96FZ2 354 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 SYT11Q9BT88 431 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 CPEB1Q9BZB8 566 aaKnown RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 DHX35Q9H5Z1 703 aaKnown RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 NOL6Q9H6R4 1146 aaKnown RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 DNAJC28Q9NX36 388 aa12.12□□□□□ -0.47
MED28-203ENST00000503945 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
MED28-203ENST00000503945 TDRD6O60522 2096 aaKnown RBP12.11□□□□□ -0.47
MED28-203ENST00000503945 NYNRINQ9P2P1 1898 aaKnown RBP12.11□□□□□ -0.47
MED28-203ENST00000503945 POM121BA6NF01 834 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 ARHGAP42A6NI28 874 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 EIF4E1BA6NMX2 242 aaKnown RBP12.11□□□□□ -0.47
MED28-203ENST00000503945 SIGLEC6O43699 453 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 MYBL1P10243 752 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 ALPPL2P10696 532 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 TIMP2P16035 220 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 ITPKBP27987 946 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 PRKCIP41743 596 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 SUOXP51687 545 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 HNRNPKP61978 463 aaKnown RBP eCLIP12.11□□□□□ -0.47
MED28-203ENST00000503945 IQCB1Q15051 598 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 CYTH1Q15438 398 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 BOLA3Q53S33 107 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 KANSL1Q7Z3B3 1105 aa12.11□□□□□ -0.47
MED28-203ENST00000503945 PTAR1Q7Z6K3 402 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms