RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 TRABD2AQ86V40 505 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 ACVR1CQ8NER5 493 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 GSDMBQ8TAX9 411 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 DDI1Q8WTU0 396 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 SLC44A1Q8WWI5 657 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 TADA1Q96BN2 335 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 CCT8L2Q96SF2 557 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 FERMT1Q9BQL6 677 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 FEM1AQ9BSK4 669 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 PRKD2Q9BZL6 878 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 MUC3BQ9H195 1237 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 SLC25A51Q9H1U9 297 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 MAGEH1Q9H213 219 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 TLE6Q9H808 572 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 NOD2Q9HC29 1040 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 SH3BP1Q9Y3L3 701 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 WNT6Q9Y6F9 365 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 RPS6KL1Q9Y6S9 549 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 CHD5Q8TDI0 1954 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 MYLKQ15746 1914 aa7.4□□□□□ -1.22
CPNE4-202ENST00000502818 ILVBLA1L0T0 632 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 FAM159BA6NKW6 160 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 NDC80O14777 642 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 CDH16O75309 829 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 LUC7L3O95232 432 aaKnown RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ATXN1LP0C7T5 689 aaKnown RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ARNTP27540 789 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 MSH2P43246 934 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 RENBPP51606 427 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 CLNS1AP54105 237 aaKnown RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 YBEYP58557 167 aaPredicted RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 MESP2Q0VG99 397 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 SF3A3Q12874 501 aaKnown RBP eCLIP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 LMAN2Q12907 356 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 GALNT3Q14435 633 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 DUSP6Q16828 381 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ANKRD20A4Q4UJ75 823 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 TCEAL5Q5H9L2 206 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ATXN7L2Q5T6C5 722 aaPredicted RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 TMCO4Q5TGY1 634 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ESRP1Q6NXG1 681 aaKnown RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 CYB5D1Q6P9G0 228 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 CHST9Q7L1S5 443 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 TDRPQ86YL5 185 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ARID3BQ8IVW6 561 aaPredicted RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ANKRD42Q8N9B4 389 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 OR6K2Q8NGY2 324 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 SMG7Q92540 1137 aaKnown RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ASIC4Q96FT7 647 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 LMLNQ96KR4 655 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 CYTH2Q99418 400 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 TASP1Q9H6P5 420 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 LRRC40Q9H9A6 602 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 PPANQ9NQ55 473 aaKnown RBP7.4□□□□□ -1.23
CPNE4-202ENST00000502818 VPS51Q9UID3 782 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 GRID1Q9ULK0 1009 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 ARHGAP26Q9UNA1 814 aa7.4□□□□□ -1.23
CPNE4-202ENST00000502818 E2F8A0AVK6 867 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 TMEM120BA0PK00 339 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 KLHL33A6NCF5 533 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 ALDH1A2O94788 518 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 PDHA1P08559 390 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 PGAM1P18669 254 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 PHBP35232 272 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 AVPR1AP37288 418 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 MDH1P40925 334 aaKnown RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 IFNAR2P48551 515 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 STK19P49842 368 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 SCNN1BP51168 640 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 TNK2Q07912 1038 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 CDH17Q12864 832 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 PRPSAP1Q14558 356 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 ZNF77Q15935 545 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 ANO4Q32M45 955 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 RARS2Q5T160 578 aaKnown RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 NAIF1Q69YI7 327 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 CEP128Q6ZU80 1094 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 CCDC121Q6ZUS5 278 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 SH2D5Q6ZV89 423 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 SETD3Q86TU7 594 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 TMEM135Q86UB9 458 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 LRRC49Q8IUZ0 686 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 MFN1Q8IWA4 741 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 NAT16Q8N8M0 369 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 RNF217Q8TC41 542 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 VOPP1Q96AW1 172 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 LRRC39Q96DD0 335 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 ZFYVE19Q96K21 471 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 RPL10LQ96L21 214 aaKnown RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 GCNAQ96QF7 691 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 CCDC77Q9BR77 488 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 FRMD8Q9BZ67 464 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 KCNK9Q9NPC2 374 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 BATF3Q9NR55 127 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 TDP1Q9NUW8 608 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 PSMC3IPQ9P2W1 217 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 LHX3Q9UBR4 397 aa7.39□□□□□ -1.23
CPNE4-202ENST00000502818 UBA2Q9UBT2 640 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-202ENST00000502818 VPS28Q9UK41 221 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms