RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 YWHAQP27348 245 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 COPB2P35606 906 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 CACNA2D1P54289 1103 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 HDAC4P56524 1084 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 PRPF4BQ13523 1007 aaKnown RBP5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 FGFBP1Q14512 234 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 TMEM266Q2M3C6 531 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 BMP2KLQ5H9B9 411 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 AKNAD1Q5T1N1 836 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 TBC1D9BQ66K14 1250 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 LRIG3Q6UXM1 1119 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 IGFN1Q86VF2 1251 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 CCDC25Q86WR0 208 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 CHSY1Q86X52 802 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 KIAA2013Q8IYS2 634 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 POC5Q8NA72 575 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 KCTD6Q8NC69 237 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 OR4N2Q8NGD1 307 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 CNDP2Q96KP4 475 aaKnown RBP5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 ZNF341Q9BYN7 854 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 TOR3AQ9H497 397 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 PLEKHA4Q9H4M7 779 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 IL17RBQ9NRM6 502 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 MRPL15Q9P015 296 aaKnown RBP5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 ABI3Q9P2A4 366 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 SERGEFQ9UGK8 458 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 FAM96BQ9Y3D0 163 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 MAGED1Q9Y5V3 778 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 SMARCA2P51531 1590 aa5.55□□□□□ -1.52
HMGB1P3-201ENST00000502802 HMGXB3Q12766 1538 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 SLC22A23A1A5C7 686 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 A8MV72 311 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 CDRT15L2A8MXV6 281 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 NPIPB11E5RHQ5 1161 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 SMIM22K7EJ46 135 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 ADAM20O43506 726 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 NARSO43776 548 aaKnown RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 SLC25A17O43808 307 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 NEURL1O76050 574 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 RNF8O76064 485 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 CYP2A6P11509 494 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 KRT10P13645 584 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 GABRB1P18505 474 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 PTGER1P34995 402 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 MRPL12P52815 198 aaKnown RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 ROR1Q01973 937 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 NTRK2Q16620 822 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 ALG11Q2TAA5 492 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 SYTL3Q4VX76 610 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 GARNL3Q5VVW2 1013 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 AAGABQ6PD74 315 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 GLDNQ6ZMI3 551 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 TBC1D26Q86UD7 250 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 DHX40Q8IX18 779 aaKnown RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 TEX11Q8IYF3 940 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 PNLDC1Q8NA58 520 aaKnown RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 ZNF398Q8TD17 642 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 NELL1Q92832 810 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 PABPC5Q96DU9 382 aaKnown RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 SAT2Q96F10 170 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 CCDC34Q96HJ3 373 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 BBS4Q96RK4 519 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 NUF2Q9BZD4 464 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 ACTR5Q9H9F9 607 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 KIF9Q9HAQ2 790 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 GIMAP4Q9NUV9 329 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 PLK2Q9NYY3 685 aa5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 ZHX1Q9UKY1 873 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P3-201ENST00000502802 UTYO14607 1347 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 DPPA5A6NC42 116 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 TMEM191CA6NGB0 347 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 FAM90A8PA6NJQ4 464 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 EBAG9O00559 213 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 TP73O15350 636 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 SEC14L5O43304 696 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 NDUFS3O75489 264 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 TMCC1O94876 653 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CSPG5O95196 566 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 MT-CYBP00156 380 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 RPN1P04843 607 aaKnown RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 FAM90A13PP0C7W8 464 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 FAM90A24PP0C7X0 464 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 INSRRP14616 1297 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 GPD1P21695 349 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 MCM7P33993 719 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CENPAP49450 140 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 HSD17B4P51659 736 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CLCNKBP51801 687 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 TERF1P54274 439 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 SLC12A2P55011 1212 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 F2RL1P55085 397 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CLDN2P57739 230 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 YPEL5P62699 121 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 SLC18A2Q05940 514 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 RUNX2Q13950 521 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 PGM5Q15124 567 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 JADE1Q6IE81 842 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CRELD2Q6UXH1 353 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 AMIGO2Q86SJ2 522 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms