RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GANCQ8TET4 914 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 NSMCE3Q96MG7 304 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 PIEZO1Q92508 2521 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 PLRG1O43660 514 aaKnown RBP25.43■■□□□ 1.66
LSM6-202ENST00000502781 UGT2B4P06133 528 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 CCNB1P14635 433 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 PTGER3P43115 390 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 MAPK8P45983 427 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 ADPRHP54922 357 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 AP1S1P61966 158 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 PRKD1Q15139 912 aaPredicted RBP25.43■■□□□ 1.66
LSM6-202ENST00000502781 RPS6KA1Q15418 735 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 GDPD4Q6W3E5 623 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 ERN2Q76MJ5 926 aaKnown RBP25.43■■□□□ 1.66
LSM6-202ENST00000502781 NUDCD1Q96RS6 583 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 IL12RB2Q99665 862 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 TLR10Q9BXR5 811 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 KDM4CQ9H3R0 1056 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 PYCARDQ9ULZ3 195 aa25.43■■□□□ 1.66
LSM6-202ENST00000502781 METTL12A8MUP2 240 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 GJB3O75712 270 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 TJP3O95049 919 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 EPN2O95208 641 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 RETP07949 1114 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 PLA2G5P39877 138 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 TAS2R38P59533 333 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 CCDC15Q0P6D6 951 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 KLF1Q13351 362 aaPredicted RBP25.42■■□□□ 1.66
LSM6-202ENST00000502781 RALGPS1Q5JS13 557 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 PARS2Q7L3T8 475 aaKnown RBP25.42■■□□□ 1.66
LSM6-202ENST00000502781 HCAR2Q8TDS4 363 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 FOXJ1Q92949 421 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 ZNF641Q96N77 438 aaPredicted RBP25.42■■□□□ 1.66
LSM6-202ENST00000502781 C6orf106Q9H6K1 298 aaPredicted RBP25.42■■□□□ 1.66
LSM6-202ENST00000502781 DYRK4Q9NR20 520 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 DKK3Q9UBP4 350 aa25.42■■□□□ 1.66
LSM6-202ENST00000502781 TSPAN11A1L157 253 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 C16orf96A6NNT2 1141 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 KCNK1O00180 336 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 SCNN1BP51168 640 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 NEK3P51956 506 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 NOMO1Q15155 1222 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 NCEH1Q6PIU2 408 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 DEFB119Q8N690 84 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 OR2T34Q8NGX1 318 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 OR14C36Q8NHC7 312 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 KLHL32Q96NJ5 620 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 CARD9Q9H257 536 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 SUV39H2Q9H5I1 410 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 NT5MQ9NPB1 228 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 RBM22Q9NW64 420 aaKnown RBP eCLIP25.41■■□□□ 1.66
LSM6-202ENST00000502781 ATP8A1Q9Y2Q0 1164 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 PCDHGA5Q9Y5G8 931 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 THADAQ6YHU6 1953 aa25.41■■□□□ 1.66
LSM6-202ENST00000502781 SHROOM3Q8TF72 1996 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 BCLAF3A2AJT9 711 aaKnown RBP25.4■■□□□ 1.66
LSM6-202ENST00000502781 TRAFD1O14545 582 aaPredicted RBP25.4■■□□□ 1.66
LSM6-202ENST00000502781 PIGNO95427 931 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 ADRB3P13945 408 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 DHPSP49366 369 aaPredicted RBP25.4■■□□□ 1.66
LSM6-202ENST00000502781 MAXP61244 160 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 AP1B1Q10567 949 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 ZBTB17Q13105 803 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 XRCC4Q13426 336 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 LYSMD4Q5XG99 296 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 CNTD1Q8N815 330 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 ACTL9Q8TC94 416 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 TFB1MQ8WVM0 346 aaKnown RBP25.4■■□□□ 1.66
LSM6-202ENST00000502781 SPOCK2Q92563 424 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 HAUS1Q96CS2 278 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 ECHDC3Q96DC8 303 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 FAM122AQ96E09 287 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 HSPA12BQ96MM6 686 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 ATP13A3Q9H7F0 1226 aa25.4■■□□□ 1.66
LSM6-202ENST00000502781 TRMT1Q9NXH9 659 aaKnown RBP25.4■■□□□ 1.66
LSM6-202ENST00000502781 FAM186AA6NE01 2351 aa25.39■■□□□ 1.66
LSM6-202ENST00000502781 LRRC72A6NJI9 287 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 USP27XA6NNY8 438 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 HACD1B0YJ81 288 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 JCHAINP01591 159 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 OTUD4Q01804 1114 aaKnown RBP25.39■■□□□ 1.65
LSM6-202ENST00000502781 PEAR1Q5VY43 1037 aaPredicted RBP25.39■■□□□ 1.65
LSM6-202ENST00000502781 CAMK1DQ8IU85 385 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 DNASE2BQ8WZ79 361 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 RUBCNQ92622 972 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 POLR1EQ9GZS1 481 aaKnown RBP25.39■■□□□ 1.65
LSM6-202ENST00000502781 NOD2Q9HC29 1040 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 GMEB2Q9UKD1 530 aa25.39■■□□□ 1.65
LSM6-202ENST00000502781 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.39■■□□□ 1.65
LSM6-202ENST00000502781 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.38■■□□□ 1.65
LSM6-202ENST00000502781 AP1G1O43747 822 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 HLA-DQB2P05538 268 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 IGHV4-34P06331 123 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 KIAA0895LQ68EN5 471 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 B4GALNT4Q76KP1 1039 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 ARMCX6Q7L4S7 300 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 ZC3H18Q86VM9 953 aaKnown RBP25.38■■□□□ 1.65
LSM6-202ENST00000502781 ARRDC2Q8TBH0 407 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 RAB7BQ96AH8 199 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 QKIQ96PU8 341 aaKnown RBP eCLIP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms