RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CREB3L2Q70SY1 520 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 PRSS45Q7RTY3 260 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.61□□□□□ -1.99
SMAD1-203ENST00000502342 NR2C2APQ86WQ0 139 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 HERC6Q8IVU3 1022 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 CLIP4Q8N3C7 705 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 ANKRD42Q8N9B4 389 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 NEXN-AS1Q8NBZ9 246 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 RTP4Q96DX8 246 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 YME1L1Q96TA2 773 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 HERPUD2Q9BSE4 406 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 SLC25A33Q9BSK2 321 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMAD1-203ENST00000502342 MSTO1Q9BUK6 570 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 MROH8Q9H579 483 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 GDAQ9Y2T3 454 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 PCDHGB5Q9Y5G0 923 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 CLDN16Q9Y5I7 305 aa2.61□□□□□ -1.99
SMAD1-203ENST00000502342 IGHV4-28A0A0C4DH34 117 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 ARHGAP10A1A4S6 786 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 DENND3A2RUS2 1198 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 EME2A4GXA9 379 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 VWA3AA6NCI4 1184 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 BTBD18B2RXH4 712 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 PRR23D1E9PI22 279 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 PIP5K1CO60331 668 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 MTA2O94776 668 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 CNPP09543 421 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 PRR23D2P0DMB1 279 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 SLC2A4P14672 509 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 CTPS1P17812 591 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 RPL3P39023 403 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 COMPP49747 757 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 PEX5P50542 639 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 RPL36AP83881 106 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 SLC18A2Q05940 514 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 DDR1Q08345 913 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 TBL3Q12788 808 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 PPFIA1Q13136 1202 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 CTTNQ14247 550 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 ARHGEF6Q15052 776 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 TAF12Q16514 161 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 PLEKHO1Q53GL0 409 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 C8orf82Q6P1X6 216 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 SPSB3Q6PJ21 355 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 C18orf65Q6ZTR6 163 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 H1FNTQ75WM6 255 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 ARMC9Q7Z3E5 817 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 ADGRG6Q86SQ4 1221 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 RBM23Q86U06 439 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 MON1AQ86VX9 555 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 DENND6AQ8IWF6 608 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 MB21D2Q8IYB1 491 aaPredicted RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 CPXM2Q8N436 756 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 TCP11L2Q8N4U5 519 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 NKAPQ8N5F7 415 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 USP38Q8NB14 1042 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 MCPH1Q8NEM0 835 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 ZMIZ2Q8NF64 920 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 NOC3LQ8WTT2 800 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 FAM216AQ8WUB2 273 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 TRIB2Q92519 343 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 OTULINQ96BN8 352 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 CLSTN3Q9BQT9 956 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 PYM1Q9BRP8 204 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 TAOK3Q9H2K8 898 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 RIC8AQ9NPQ8 531 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 CD93Q9NPY3 652 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 RASSF1Q9NS23 344 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 SPATS2LQ9NUQ6 558 aaKnown RBP2.6□□□□□ -1.99
SMAD1-203ENST00000502342 TMEM51Q9NW97 253 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 IL1RAPL1Q9NZN1 696 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 CTNNAL1Q9UBT7 734 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 ZNF112Q9UJU3 913 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 RAI2Q9Y5P3 530 aa2.6□□□□□ -1.99
SMAD1-203ENST00000502342 IGLV5-52A0A0A0MRZ9 124 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 C17orf113A0A1B0GUU1 675 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 PLSCR5A0PG75 271 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 DYTNA2CJ06 578 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 CLEC18AA5D8T8 446 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 J3KR12 359 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 PER2O15055 1255 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 RGS11O94810 467 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 SOX30O94993 753 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 VNN2O95498 520 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 ZNF8P17098 575 aaPredicted RBP2.59□□□□□ -1.99
SMAD1-203ENST00000502342 MYF6P23409 242 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 PGM1P36871 562 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 CENPAP49450 140 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 MXI1P50539 228 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 SEC61A1P61619 476 aaKnown RBP2.59□□□□□ -1.99
SMAD1-203ENST00000502342 YWHAZP63104 245 aaKnown RBP2.59□□□□□ -1.99
SMAD1-203ENST00000502342 BNC1Q01954 994 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 FAM27E3Q08E93 113 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 ST3GAL1Q11201 340 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 ITGADQ13349 1161 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 NFIL3Q16649 462 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 KIF19Q2TAC6 998 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 EFHC1Q5JVL4 640 aa2.59□□□□□ -1.99
SMAD1-203ENST00000502342 SLC22A25Q6T423 547 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms